Xin Lin
Xiamen University
71 Papers
29 Citations
Xin Lin is an academic researcher from Xiamen University. The author has contributed to research in topics: Biology & Phaeodactylum tricornutum. The author has an hindex of 16, co-authored 45 publications. Previous affiliations of Xin Lin include École Normale Supérieure.
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Papers
The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis
Senjie Lin,Senjie Lin,Shifeng Cheng,Shifeng Cheng,Bo Song,Xiao Zhong,Xin Lin,Wujiao Li,Ling Li,Yaqun Zhang,Huan Zhang,Zhiliang Ji,Mei-Chun Cai,Yunyun Zhuang,Xinguo Shi,Lingxiao Lin,Lu Wang,Zhaobao Wang,Xin Liu,Sheng Yu,Peng Zeng,Han Hao,Quan Zou,Chengxuan Chen,Yanjun Li,Ying Wang,Chunyan Xu,Shanshan Meng,Xun Xu,Jun Wang,Jun Wang,Jun Wang,Huanming Yang,Huanming Yang,David A. Campbell,Nancy R. Sturm,Steve Dagenais-Bellefeuille,David Morse +37 more
TL;DR: The genome of the Coral symbiont Symbiodinium reveals fundamental aspects of the coral-alga symbiosis and finds biochemical complementarity between genomes of S. kawagutii and the anthozoan Acropora, providing a resource for studying the molecular basis and evolution of coral symbiosis.
449
Protocol: Chromatin immunoprecipitation (ChIP) methodology to investigate histone modifications in two model diatom species
TL;DR: Validation of the protocol provides a set of genes and transposable elements that can be used as controls for studies using ChIP in each diatom species and can be easily adapted to other diatoms and eukaryotic phytoplankton species for genetic and biochemical studies.
An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum.
Alaguraj Veluchamy,Alaguraj Veluchamy,Achal Rastogi,Xin Lin,Xin Lin,Bérangère Lombard,Omer Murik,Yann Thomas,Florent Dingli,Maximo Rivarola,Maximo Rivarola,Sandra Ott,Xinyue Liu,Yezhou Sun,Pablo D. Rabinowicz,James S. McCarthy,Andrew E. Allen,Andrew E. Allen,Damarys Loew,Chris Bowler,Leila Tirichine +20 more
TL;DR: This study is the first genome-wide characterization of the histone code from a stramenopile and a marine phytoplankton, and represents an important initial step for understanding the evolutionary history of chromatin and how epigenetic modifications affect gene expression in response to environmental cues in marine environments.
Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum
Alaguraj Veluchamy,Xin Lin,Xin Lin,Florian Maumus,Florian Maumus,Maximo Rivarola,Maximo Rivarola,Jaysheel Bhavsar,Todd Creasy,Kimberly O'Brien,Naomi Sengamalay,Luke J. Tallon,Andrew D. Smith,Edda Rayko,Ikhlak Ahmed,Stéphane Le Crom,Gregory K. Farrant,Jean-Yves Sgro,Sue A. Olson,Sandra Splinter BonDurant,Andrew E. Allen,Pablo D. Rabinowicz,Michael R. Sussman,Chris Bowler,Leila Tirichine +24 more
TL;DR: The first whole-genome methylome from a stramenopile, the marine model diatom Phaeodactylum tricornutum, is reported, finding extensive methylation in transposable elements and that genes with partial methylation tend to be constitutively expressed.
101
Transcriptomic and microRNAomic profiling reveals multi-faceted mechanisms to cope with phosphate stress in a dinoflagellate
TL;DR: Integrative transcriptomic and microRNAomic analyses show that enhanced DOP utilization, accelerated ATP cycling and repressed sulfolipid degradation constitute a comprehensive strategy to cope with P deficiency in a model dinoflagellate.