About: Workstation is a research topic. Over the lifetime, 5144 publications have been published within this topic receiving 94988 citations. The topic is also known as: computer workstation & workstation computer.
TL;DR: A new approach to solve the ‘molecular graphics problem’ is described, which shares the work between GPU and multiple CPU cores, generates high-quality results with perfectly round spheres, shadows and ambient lighting and requires only OpenGL 1.0 functionality.
Abstract: SUMMARY: Today's graphics processing units (GPUs) compose the scene from individual triangles. As about 320 triangles are needed to approximate a single sphere-an atom-in a convincing way, visualizing larger proteins with atomic details requires tens of millions of triangles, far too many for smooth interactive frame rates. We describe a new approach to solve this 'molecular graphics problem', which shares the work between GPU and multiple CPU cores, generates high-quality results with perfectly round spheres, shadows and ambient lighting and requires only OpenGL 1.0 functionality, without any pixel shader Z-buffer access (a feature which is missing in most mobile devices). AVAILABILITY AND IMPLEMENTATION: YASARA View, a molecular modeling program built around the visualization algorithm described here, is freely available (including commercial use) for Linux, MacOS, Windows and Android (Intel) from www.YASARA.org. CONTACT: elmar@yasara.org SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
TL;DR: ARIES as discussed by the authors is a database management system applicable not only to database management systems but also to persistent object-oriented languages, recoverable file systems and transaction-based operating systems.
Abstract: DB2TM, IMS, and TandemTM systems. ARIES is applicable not only to database management systems but also to persistent object-oriented languages, recoverable file systems and transaction-based operating systems. ARIES has been implemented, to varying degrees, in IBM's OS/2TM Extended Edition Database Manager, DB2, Workstation Data Save Facility/VM, Starburst and QuickSilver, and in the University of Wisconsin's EXODUS and Gamma database machine.
TL;DR: This paper describes the motivation, architecture and performance of SPIN, an extensible operating system that provides an extension infrastructure together with a core set of extensible services that allow applications to safely change the operating system's interface and implementation.
Abstract: This paper describes the motivation, architecture and performance of SPIN, an extensible operating system. SPIN provides an extension infrastructure, together with a core set of extensible services, that allow applications to safely change the operating system's interface and implementation. Extensions allow an application to specialize the underlying operating system in order to achieve a particular level of performance and functionality. SPIN uses language and link-time mechanisms to inexpensively export fine-grained interfaces to operating system services. Extensions are written in a type safe language, and are dynamically linked into the operating system kernel. This approach offers extensions rapid access to system services, while protecting the operating system code executing within the kernel address space. SPIN and its extensions are written in Modula-3 and run on DEC Alpha workstations.
TL;DR: New open-source software called cisTEM (computational imaging system for transmission electron microscopy) for the processing of data for high-resolution electron cryo-microscopy and single-particle averaging is developed, optimized to enable processing of typical datasets on a high-end, CPU-based workstation in half a day or less, comparable to GPU-accelerated processing.
Abstract: We have developed new open-source software called cisTEM (computational imaging system for transmission electron microscopy) for the processing of data for high-resolution electron cryo-microscopy and single-particle averaging. cisTEM features a graphical user interface that is used to submit jobs, monitor their progress, and display results. It implements a full processing pipeline including movie processing, image defocus determination, automatic particle picking, 2D classification, ab-initio 3D map generation from random parameters, 3D classification, and high-resolution refinement and reconstruction. Some of these steps implement newly-developed algorithms; others were adapted from previously published algorithms. The software is optimized to enable processing of typical datasets (2000 micrographs, 200 k - 300 k particles) on a high-end, CPU-based workstation in half a day or less, comparable to GPU-accelerated processing. Jobs can also be scheduled on large computer clusters using flexible run profiles that can be adapted for most computing environments. cisTEM is available for download from cistem.org.
TL;DR: This report compares the performance of different computer systems in solving dense systems of linear equations, ranging from a CRAY Y-MP to scientific workstations such as the Apollo and Sun to IBM PCs.
Abstract: This report compares the performance of different computer systems in solving dense systems of linear equations. The comparison involves approximately a hundred computers, ranging from a CRAY Y-MP to scientific workstations such as the Apollo and Sun to IBM PCs.