About: Picea abies is a research topic. Over the lifetime, 5879 publications have been published within this topic receiving 172008 citations. The topic is also known as: Norway spruce.
TL;DR: The draft assembly of the 20-gigabase genome of Norway spruce (Picea abies), the first available for any gymnosperm, is presented, revealing numerous long (>10,000 base pairs) introns, gene-like fragments, uncharacterized long non-coding RNAs and short RNAs, which opens up new genomic avenues for conifer forestry and breeding.
Abstract: Conifers have dominated forests for more than 200 million years and are of huge ecological and economic importance. Here we present the draft assembly of the 20-gigabase genome of Norway spruce (Picea abies), the first available for any gymnosperm. The number of well-supported genes (28,354) is similar to the >100 times smaller genome of Arabidopsis thaliana, and there is no evidence of a recent whole-genome duplication in the gymnosperm lineage. Instead, the large genome size seems to result from the slow and steady accumulation of a diverse set of long-terminal repeat transposable elements, possibly owing to the lack of an efficient elimination mechanism. Comparative sequencing of Pinus sylvestris, Abies sibirica, Juniperus communis, Taxus baccata and Gnetum gnemon reveals that the transposable element diversity is shared among extant conifers. Expression of 24-nucleotide small RNAs, previously implicated in transposable element silencing, is tissue-specific and much lower than in other plants. We further identify numerous long (>10,000 base pairs) introns, gene-like fragments, uncharacterized long non-coding RNAs and short RNAs. This opens up new genomic avenues for conifer forestry and breeding.
TL;DR: The data indicate that organic nitrogen is important for these different plants, even when they are competing with each other and with non-symbiotic microorganisms, which has major implications for the understanding of the effects of nitrogen deposition, global warming and intensified forestry.
Abstract: Plant growth in the boreal forest, the largest terrestrial biome, is generally limited by the availability of nitrogen. The presumed cause of this limitation is slow mineralization of soil organic nitrogen1,2. Here we demonstrate, to our knowledge for the first time, the uptake of organic nitrogen in the field by the trees Pinus sylvestris and Picea abies, the dwarf shrub Vaccinium myrtillus and the grass Deschampsia flexuosa. These results show that these plants, irrespective of their different types of root–fungal associations (mycorrhiza), bypass nitrogen mineralization. A trace of the amino acid glycine, labelled with the stable isotopes 13C and 15N, was injected into the organic (mor) layer of an old successional boreal coniferous forest. Ratios of 13C:15N in the roots showed that at least 91, 64 and 42% of the nitrogen from the absorbed glycine was taken up in intact glycine by the dwarf shrub, the grass and the trees, respectively. Rates of glycine uptake were similar to those of 15N-ammonium. Our data indicate that organic nitrogen is important for these different plants, even when they are competing with each other and with non-symbiotic microorganisms. This has major implications for our understanding of the effects of nitrogen deposition, global warming and intensified forestry.
TL;DR: Exposure to high concentrations of gaseous pollutants, SO2, NOx, and ozone has had no long-lasting direct effect on needles, and pathogens have only been secondary agents; deposition of sulfur, nitrate, and ammonium have significantly modified plant nutrition and soil chemistry.
Abstract: Symptoms of forest decline of spruce in Europe range from needle yellowing and loss to tree and stand mortality. In a study area in northeast Bavaria, West Germany, where forest decline was initially detected, exposure to high concentrations of gaseous pollutants, SO2, NOx, and ozone has had no long-lasting direct effect on needles, and pathogens have only been secondary agents. Deposition of sulfur, nitrate, and ammonium, however, have significantly modified plant nutrition and soil chemistry. Spruce roots apparently take up ammonium rather than nitrate with an antagonistic effect on uptake of Mg. Nitrate left in the soil solution is leached together with sulfate to ground water, accelerating soil acidification and decreasing Ca/Al and Mg/Al ratios in the soil solution. Soil solution chemistry affects root development, and water and nutrient uptake. Had all nutrients become equally deficient, spruce trees probably could have adjusted by retarding their growth. However, canopy uptake of atmospheric nitrogen in addition to root uptake stimulated growth and caused a nitrogen to cation imbalance to develop; this imbalance resulted in the decline symptoms.
TL;DR: While species influence microbially mediated decomposition primarily through differences in litter lignin, differences among species in litter Ca are most important in determining species effects on forest floor leaf litter dynamics among these 14 tree species, apparently because of the influence of litter Ca on earth worms.
Abstract: We studied the effects of tree species on leaf litter decomposition and forest floor dynamics in a common garden experiment of 14 tree species (Abies alba, Acer platanoides, Acer pseudoplatanus, Betula pendula, Carpinus betulus, Fagus sylvatica, Larix decidua, Picea abies, Pinus nigra, Pinus sylvestris, Pseudotsuga menziesii, Quercus robur, Quercus rubra, and Tilia cordata) in southwestern Poland. We used three simultaneous litter bag experiments to tease apart species effects on decomposition via leaf litter chemistry vs. effects on the decomposition environment. Decomposition rates of litter in its plot of origin were negatively correlated with litter lignin and positively correlated with mean annual soil temperature (MATsoil) across species. Likewise, decomposition of a common litter type across all plots was positively associated with MATsoil, and decomposition of litter from all plots in a common plot was negatively related to litter lignin but positively related to litter Ca. Taken together, these results indicate that tree species influenced microbial decomposition primarily via differences in litter lignin (and secondarily, via differences in litter Ca), with high-lignin (and low-Ca) species decomposing most slowly, and by affecting MATsoil, with warmer plots exhibiting more rapid decomposition. In addition to litter bag experiments, we examined forest floor dynamics in each plot by mass balance, since earthworms were a known component of these forest stands and their access to litter in litter bags was limited. Forest floor removal rates estimated from mass balance were positively related to leaf litter Ca (and unrelated to decay rates obtained using litter bags). Litter Ca, in turn, was positively related to the abundance of earthworms, particularly Lumbricus terrestris. Thus, while species influence microbially mediated decomposition primarily through differences in litter lignin, differences among species in litter Ca are most important in determining species effects on forest floor leaf litter dynamics among these 14 tree species, apparently because of the influence of litter Ca on earthworm activity. The overall influence of these tree species on leaf litter decomposition via effects on both microbial and faunal processing will only become clear when we can quantify the decay dynamics of litter that is translocated belowground by earthworms.
TL;DR: Microbial respiration seemed to dominate the respiratory CO2 loss from the forest floor and the comparison of the annual soil CO2 efflux in the 47-year old P. abies stand with annual litterfall and root net primary productivity estimates supported this conclusion.
Abstract: The response of soil respiration to varying environmental factors was studied in four Picea abies stands (47-, 87-, 111- and 146-year old) during the 1998 growing season. While within-site variations of soil CO2 efflux (up to 1.6 μmol CO2 m−2 s−1) were larger than their diurnal variability ( 60%). Trenching shallow fine roots during collar insertion and mechanical inhibition of root in-growth during the following months allowed fine root respiration to be separated from microbial respiration only in times of highest root growth. Microbial respiration seemed to dominate the respiratory CO2 loss from the forest floor (>70%). The comparison of the annual soil CO2 efflux in the 47-year old P. abies stand (about 710 g C m−2 yr−1) with annual litterfall and root net primary productivity estimates supported this conclusion.