TL;DR: The TAME system is an instantiation of the TAME software engineering process model as an ISEE (integrated software engineering environment) and the first in a series of Tame system prototypes has been developed.
Abstract: Experience from a dozen years of analyzing software engineering processes and products is summarized as a set of software engineering and measurement principles that argue for software engineering process models that integrate sound planning and analysis into the construction process. In the TAME (Tailoring A Measurement Environment) project at the University of Maryland, such an improvement-oriented software engineering process model was developed that uses the goal/question/metric paradigm to integrate the constructive and analytic aspects of software development. The model provides a mechanism for formalizing the characterization and planning tasks, controlling and improving projects based on quantitative analysis, learning in a deeper and more systematic way about the software process and product, and feeding the appropriate experience back into the current and future projects. The TAME system is an instantiation of the TAME software engineering process model as an ISEE (integrated software engineering environment). The first in a series of TAME system prototypes has been developed. An assessment of experience with this first limited prototype is presented including a reassessment of its initial architecture. >
TL;DR: This easy-to-read, non-technical book examines and synthesizes the lessons of leading edge companies grappling with seven revolutionary IT changes that have combined to create an entirely new paradigm for competitive information processing - now and for the future.
Abstract: This easy-to-read, non-technical book examines and synthesizes the lessons of leading edge companies grappling with seven revolutionary IT changes. According to the authors, these changes have combined to create an entirely new paradigm for competitive information processing - now and for the future. This book zeros in on changes such as the shift from proprietary to open systems, from host-based to network-based systems, and stand-alone to integrated software applications.
TL;DR: In this article, the anarchy-based scheduling model for the scheduling of processes and resources by allowing each processor to access a single image of the operating system stored in the common memory that operates on a common set of operating system shared resources.
Abstract: An integrated software architecture for a highly parallel multiprocessor system having multiple tightly-coupled processors that share a common memory efficiently controls the interface with and execution of programs on such a multiprocessor system. The software architecture combines a symmetrically integrated multithreaded operating system and an integrated parallel user environment. The operating system distributively implements an anarchy-based scheduling model for the scheduling of processes and resources by allowing each processor to access a single image of the operating system stored in the common memory that operates on a common set of operating system shared resources. The user environment provides a common visual representation for a plurality of program development tools that provide compilation, execution and debugging capabilities for multithreaded user programs and assumes parallelism as the standard mode of operation.
TL;DR: In this article, the anarchy-based scheduling model for the scheduling of processes and resources by allowing each processor to access a single image of the operating system stored in the common memory that operates on a common set of operating system shared resources.
Abstract: An integrated software architecture for a highly parallel multiprocessor system having multiple tightly-coupled processors that share a common memory efficiently controls the interface with and execution of programs on such a multiprocessor system. The software architecture combines a symmetrically integrated multithreaded operating system and an integrated parallel user environment. The operating system distributively implements an anarchy-based scheduling model for the scheduling of processes and resources by allowing each processor to access a single image of the operating system stored in the common memory that operates on a common set of operating system shared resources. The user environment provides a common visual representation for a plurality of program development tools that provide compilation, execution and debugging capabilities for multithreaded user programs and assumes parallelism as the standard mode of operation.
TL;DR: The types of software tools that are required at different stages of systems biology research and the current options that are available for systems biology researchers are described.
Abstract: Understanding complex biological systems requires extensive support from software tools. Such tools are needed at each step of a systems biology computational workflow, which typically consists of data handling, network inference, deep curation, dynamical simulation and model analysis. In addition, there are now efforts to develop integrated software platforms, so that tools that are used at different stages of the workflow and by different researchers can easily be used together. This Review describes the types of software tools that are required at different stages of systems biology research and the current options that are available for systems biology researchers. We also discuss the challenges and prospects for modelling the effects of genetic changes on physiology and the concept of an integrated platform.