TL;DR: In this paper, specific absorption coefficients for individual carotenoids and chlorophylls a and b, as well as the E 1% 1cm values for combined carotensoids, have been (re)estimated using 6 solvents (80 % acetone, chloroform, diethyl ether, dimethyl formamide and methanol) using two different types of spectrophotometer (0.1-0.5 nm and 1-4 nm band pass resolution).
TL;DR: A fluorometric method is described which provides sensitive measurements of extracted chlorophyll a free from the errors associated with conventional acidification techniques and provides adequate sensitivity for small sample sizes even in the most oligotrophic marine and freshwater environments.
Abstract: A fluorometric method is described which provides sensitive measurements of extracted chlorophyll a free from the errors associated with conventional acidification techniques. Fluorometric optical configurations were optimized to produce maximum sensitivity to Chl a while maintaining desensitized responses from both Chl b and pheopigments. Under the most extreme Chl b:Chl a ratio likely to occur in nature (1 : 1 molar), the new method results in only a 10% overestimate of the true Chl a value, while estimates from older acidification methods are 2.5-fold low. Under conditions of high pheopigment concentrations (pheo a: Chl a = 1 : 1 molar), the new method provides Chl a estimates that are equivalent to those determined from the acidification technique. The new simple method requires a single fluorescence determination and provides adequate sensitivity for small sample sizes (<200 ml) even in the most oligotrophic marine and freshwater environments.
TL;DR: N,N-Dimethylformamide is a very convenient solvent for Chl extraction since it is effective on intact plant parts and Chl is quite stable in DMF.
Abstract: We found inconsistencies in the commonly used data for chlorophyll analysis in 80% acetone. Recently developed extinction coefficients for chlorophyll b in N,N-dimethylformamide (DMF) based on values from 80% acetone are low as a result of these inconsistencies. We determined extinction coefficients of chlorophyll a (Chl a) and chlorophyll b (Chl b) in DMF for wavelengths of 618 to 665 nanometers. The simultaneous equations necessary for quantifying Chl a, Chl b, or total Chl in DMF in the absence of other chlorophyllous pigments are: Chl a = 12.70A(664.5) - 2.79A(647); Chl b = 20.70 A(647) - 4.62A(664.5); total Chl = 17.90A(647) + 8.08A(664.5), where A = absorbance in 1.00 centimeter cuvettes and Chl = milligrams per liter.N,N-Dimethylformamide is a very convenient solvent for Chl extraction since it is effective on intact plant parts and Chl is quite stable in DMF. There was no difference in the amount of Chl extracted when plant tissue was stored for 1 or 3 days at three temperatures, with or without solvent added.
TL;DR: In this paper, a new group of photosynthetic picoplankters was identified, which are extremely abundant, and barely visible using traditional microscopic techniques, reaching concentrations greater than 105 cells ml−1 in the deep euphotic zone.
Abstract: The recent discovery of photosynthetic picoplankton has changed our understanding of marine food webs1. Both prokaryotic2,3 and eukaryotic4,5 species occur in most of the world's oceans and account for a significant proportion of global productivity6. Using shipboard flow cytometry, we have identified a new group of picoplankters which are extremely abundant, and barely visible using traditional microscopic techniques. These cells are smaller than the coccoid cyanobacteria and reach concentrations greater than 105 cells ml–1 in the deep euphotic zone. They fluoresce red and contain a divinyl chlorophyll a-like pigment, as well as chlorophyll b, α-carotene, and zeaxanthin. This unusual combination of pigments, and a distinctive prokaryotic ultrastructure, suggests that these picoplankters are free-living relatives of Prochloron7. They differ from previously reported prochlorophytes—the putative ancestors of the chloroplasts of higher plants—in that they contain α-carotene rather than β-carotene and contain a divinyl chlorophyll a-like pigment as the dominant chlorophyll.
TL;DR: A set of equations for determining chlorophyll a (Chl a) and accessory chlorophyLLs b, c2, c1 + c2 and the special case of Acaryochloris marina, which uses Chl d as its primary photosynthetic pigment and also has Chl a, have been developed for 90% acetone, methanol and ethanol solvents.
Abstract: A set of equations for determining chlorophyll a (Chl a) and accessory chlorophylls b, c
2
, c
1
+ c
2 and the special case of Acaryochloris marina, which uses Chl d as its primary photosynthetic pigment and also has Chl a, have been developed for 90% acetone, methanol and ethanol solvents. These equations for different solvents give chlorophyll assays that are consistent with each other. No algorithms for Chl c compounds (c
2
, c
1
+ c
2) in the presence of Chl a have previously been published for methanol or ethanol. The limits of detection (and inherent error, ± 95% confidence limit), for chlorophylls in all organisms tested, was generally less than 0.1 µg/ml. The Chl a and b algorithms for green algae and land plants have very small inherent errors (< 0.01 µg/ml). Chl a and d algorithms for Acaryochloris
marina are consistent with each other, giving estimates of Chl d/a ratios which are consistent with previously published estimates using HPLC and a rarely used algorithm originally published for diethyl ether in 1955. The statistical error structure of chlorophyll algorithms is discussed. The relative error of measurements of chlorophylls increases hyperbolically in diluted chlorophyll extracts because the inherent errors of the chlorophyll algorithms are constants independent of the magnitude of absorbance readings. For safety reasons, efficient extraction of chlorophylls and the convenience of being able to use polystyrene cuvettes, the algorithms for ethanol are recommended for routine assays of chlorophylls. The methanol algorithms would be convenient for assays associated with HPLC work.