TL;DR: The molecular phylogeny based on mitochondrial sequences supports the monophyly of the family Physidae and six major clades were uncovered in the analysis, corresponding to differences in penial morphology.
Abstract: The family Physidae (Pulmonata: Basommatophora) is a group of freshwater hermaphroditic snails that have a Holarctic distribution with extension into Central and South America. Despite considerable literature justifying various taxonomic schemes and groupings, no classification has been proposed using modern phylogenetic methods. In an effort to expand what is known concerning the evolutionary relationships of Physidae, we examined a portion of the mitochondrial 16S rRNA and cytochrome c oxidase subunit I genes among 66 specimens representing 28 taxa. The molecular phylogeny based on mitochondrial sequences supports the monophyly of the family Physidae. Six major clades were uncovered in the analysis, corresponding to differences in penial morphology. These six groups include the following recommended phylogenetic species and species groups: Aplexa elongata (Say), Aplexa 1 group; Physa marmorata Guilding, Aplexa 3 group; P. fontinalis (Linneaus), P. jennessi Dall and P. vernalis Taylor & Jokinen, type a group; P. gyrina Say and P .‘ ancillaria’ Say, type b group; P. acuta Draparnaud, P. spelunca Turner & Clench, P. species A and P. zionis Pilsbry, type c group; and P. pomilia Conrad and P. hendersoni Clench, type bc group.
TL;DR: It can be proposed for the first time that invasion of freshwater by Pulmonata is a unique evolutionary event and has taken place directly from the marine environment via an aquatic pathway.
Abstract: The Euthyneura are considered to be the most successful and diverse group of Gastropoda. Phylogenetically, they are riven with controversy. Previous morphology-based phylogenetic studies have been greatly hampered by rampant parallelism in morphological characters or by incomplete taxon sampling. Based on sequences of nuclear 18S rRNA and 28S rRNA as well as mitochondrial 16S rRNA and COI DNA from 56 taxa, we reconstructed the phylogeny of Euthyneura utilising Maximum Likelihood and Bayesian inference methods. The evolution of colonization of freshwater and terrestrial habitats by pulmonate Euthyneura, considered crucial in the evolution of this group of Gastropoda, is reconstructed with Bayesian approaches. We found several well supported clades within Euthyneura, however, we could not confirm the traditional classification, since Pulmonata are paraphyletic and Opistobranchia are either polyphyletic or paraphyletic with several clades clearly distinguishable. Sacoglossa appear separately from the rest of the Opisthobranchia as sister taxon to basal Pulmonata. Within Pulmonata, Basommatophora are paraphyletic and Hygrophila and Eupulmonata form monophyletic clades. Pyramidelloidea are placed within Euthyneura rendering the Euthyneura paraphyletic. Based on the current phylogeny, it can be proposed for the first time that invasion of freshwater by Pulmonata is a unique evolutionary event and has taken place directly from the marine environment via an aquatic pathway. The origin of colonisation of terrestrial habitats is seeded in marginal zones and has probably occurred via estuaries or semi-terrestrial habitats such as mangroves.
TL;DR: Contrary to DNA-taxonomy, shell morphology was not suitable for delimiting and recognising species in Radix and is proposed as a reliable, comparable, and objective means for species identification in biological research.
Abstract: Background
Reliable taxonomic identification at the species level is the basis for many biological disciplines. In order to distinguish species, it is necessary that taxonomic characters allow for the separation of individuals into recognisable, homogeneous groups that differ from other such groups in a consistent way. We compared here the suitability and efficacy of traditionally used shell morphology and DNA-based methods to distinguish among species of the freshwater snail genus Radix (Basommatophora, Pulmonata).
TL;DR: This gene proves to be a good marker for both specific determination and supraspecific lymnaeid phylogeny, and the phylogenetic trees obtained by comparison with four other molluscan species show the presence of four well-defined subgenera among the genus Lymnaea sensu lato.
Abstract: The 18S rDNA sequences of the six most common European Lymnaeidae species (Mollusca:Gastropoda:Basommatophora) have been obtained by direct PCR cycle sequencing and silver staining methods. The sequence alignment and secondary structures of the 18S rRNA gene of Lymnaea stagnalis, L. auricularia, L. peregra, L. palustris, L. glabra, and L. truncatula are analyzed. This gene proves to be a good marker for both specific determination and supraspecific lymnaeid phylogeny. The malacological importance is evident, considering the specific determination problems of individual snails and the present systematic chaos in Lymnaeidae due to their pronounced morphoanatomic uniformity, which makes a classification by traditional methods impossible. The majority (17) of the total of 43 nucleotide-substituted positions appears to be confined to a small region included in helix E10-1 of the variable region V2, enabling species group distinction: (1) the first sequence is common to L. auricularia and L. peregra; (2) the second sequence is unique to L. truncatula; and (3) the third sequence is identical for L. glabra, L. palustris, and L. stagnalis. The other 26 nucleotide-substituted positions are dispersed over the entire gene, although four grouped nucleotide positions in helix 6 of V1 are of interest in distinguishing L. glabra from both L. palustris and L. stagnalis. The phylogenetic trees obtained by comparison with four other molluscan species (a polyplacophoran, two bivalves, and a stylommatophoran gastropod) show the presence of four well-defined subgenera among the genus Lymnaea sensu lato: (1) Lymnaea (Radix), (2) Lymnaea (Galba), (3) Lymnaea (Leptolimnaea), and (4) Lymnaea (Lymnaea). Two branches, L. auricularia-L. peregra-L. truncatula and L. glabra-L. palustris-L. stagnalis, are worth mentioning from the parasitological point of view, since the two digenean species of large medical and veterinary impact transmitted by lymnaeids, Fasciola hepatica and F. gigantica, appear to be linked to the first branch.