TL;DR: None of the major sterols found in diatoms can be used as an unambiguous diatom biomarker because all of them have been reported as common sterols in other algal groups.
Abstract: Diatoms are one of the most important organisms contributing to aquatic primary productivity and their sterols are frequently used as markers for their presence and abundance. In this study, the sterol composition of >100 diatom cultures was analyzed and its distribution was compared to the diatom phylogeny to identify typical diatom biomarkers. Forty-four sterols were detected, 11 of them being commonly present as major sterols (contributing > 10% to the total sterols). 24-Methylcholesta-5,24(28)-dien-3β-ol is the most common sterol in diatoms, being present in 67% of all cultures analyzed, followed by the Δ 5 sterols, cholest-5-en-3β-ol (cholesterol), 24-methylcholest-5-en-3β-ol, and 24-ethylcholest-5-en-3β-ol. 24-Methylcholesta-5,22E-dien-3β-ol, previously suggested to be specific for diatoms, was only the fifth most common sterol; this sterol was absent in some of the major diatom groups, and high relative concentrations seem to be restricted to pennate diatoms. No sterols are restricted to specific phylogenetic groups of diatoms. Cluster analyses, however, do reveal distinct sterol distributions: Thalassiosirales typically contain high relative abundances of 24-methylcholesta-5,24(28)-dien-3β-ol, high relative abundances of cholesta-5,22E-dien-3β-ol are typical for Cymatosirales, high relative abundances of 24-ethylcholesta-5,22E-dien-3β-ol are characteristic for related Amphora, Amphiprora, and Entomoneis species, and a combination of high relative abundances of 24-methylcholest-5-en-3β-ol, 24-methylcholesta-5,24(28)-dien-3β-ol, and 24-ethylcholest-5-en-3β-ol is typical for Attheya species. High contributions of 24-methylcholesta-5,22E-dien-3β-ol (>50% of all sterols) seem to be restricted to pennate diatoms. None of the major sterols found in diatoms can be used as an unambiguous diatom biomarker because all of them have been reported as common sterols in other algal groups.
TL;DR: The free sterol compositions of two marine microalgal species Pyramimonas cf.
Abstract: The free sterol compositions of two marine microalgal species Pyramimonas cf. cordata (Prasinophyta), Attheya ussurensis sp. nov. (Bacillariophyta), and diatom bloom samples from Lake Baikal were determined by gas chromatography, gas chromatography-mass spectrometry and (for some sterol constituents) using nuclear magnetic resonance spectra. A variety of sterol profiles were found. The principal sterol in the prasinophyte P. cf. cordata, collected in the Sea of Japan near Vladivostok, was 24(R)-ethylcholesta-5,22E-dien-3beta-ol (poriferasterol), but not 24-ethyl-5,24(28)Z-dien-3beta-ol, as reported earlier in the related species Pyramimonas cordata. The principal sterol in the marine diatom A. ussurensis sp. nov. was identified as 24-ethylcholest-5-en-3beta-ol. The sample of diatom bloom caused by Stephanodiscus meyerii with admixtures of several other diatom species, contained cholesterol and 24-methylcholesta-5,24(28)-dien-3beta-ol as main sterol constituents.
TL;DR: Traditional classification of Chaetoceros species does not accurately reflect the hypothesized phylogenetic relationships of this family, and they appear to belong to a continuous grade, rather than comprising individual clades.
Abstract: SUMMARY
In order to construct a model of evolutionary relationships within the diatom family Chaetocerotaceae, 37 species of Chaetoceros Ehrenberg, representing all subgenera and 21 of 22 subgeneric sections of the genus, plus three Bacteriastrum Shadbolt species, representing both of its subgeneric sections, were subjected to cladistic analysis. One species each of Eucampia Ehrenberg, Cerataulina Peragallo, Hemiau-lus Ehrenberg, Attheya West and Gonioceros H. & M. Peragallo were used as outgroups. A matrix of 65 binary and multistate morphological characters was constructed, with data being gathered from original observation of material in the light and electron microscopes, and from the published literature. The analysis yielded 36 most-parsimonious cladograms of 316 steps; incongruence between trees is largely restricted to some taxa representing undersampled sections of Chaetoceros subg. Hyalochaete. The robustness of this hypothesis was examined in several ways. To assess the effect of character weighting, the bootstrap was used to randomly weight characters. The parsimony criterion was relaxed via a decay index, and finally, the tree length was compared to that of trees randomly generated from the data matrix. The majority of investigated species of Chaetoceros subg. Phaeoceros, Chaetoceros subg. Hyalochaete and Bacteriastrum appear to belong to a continuous grade, rather than comprising individual clades. Chaetoceros is paraphyletic. Thus, the traditional classification does not accurately reflect the hypothesized phylogenetic relationships of this family.
TL;DR: Four new taxa belonging to the genus Attheya West are described from the west coast of Britain and from the North Sea and it is suggested that all taxa should be placed withinAttheya because of similarity of horn structure and habitat preferences.
Abstract: Four new taxa belonging to the genus Attheya West are described from the west coast of Britain and from the North Sea. Attheya arenicola sp. nov. was found on sandy beaches in southwest Wales, Cornwall and the west coast of Scotland in the U.K., and on the edge of the North Sea at Renesse, Netherlands. A. flexuosa var. flexuosa sp. nov. and A. flexuosa var. enodulifer sp. nov. have been found in a similar habitat attached to cells of Hantzschia Grunow and Bacillaria Gmelin spp. A. longicorrus sp. nov. attaches to other diatoms in the plankton. Using light and electron microscopy, they are compared with A. decora West, the type species of Attheya, and with Chaetoceros sessilis Grontved, Gonioceros armatus (T. West) H. & M. Peragallo and Gonioceros septentrionalis (Ostrup) Round, Crawford & Mann. It is suggested that all taxa should be placed within Attheya because of similarity of horn structure and habitat preferences.
TL;DR: All data suggest that the investigated Attheya species form a separate group of diatoms, and there is no indication that they belong to either the Chaetocerotophyc Families or the Biddulphiophycidae.
Abstract: The phylogenetic position of diatoms belonging to the genus Attheya is presently under debate. Species belonging to this genus have been placed in the subclasses Chaetocerotophycidae and Biddulphiophycidae, but published phylogenetic trees based on 18S rDNA, morphology, and sexual reproduction indicate that this group of diatoms may be a sister group of the pennates. To clarify the position of Attheya, we studied the morphology, 18S rDNA, 16S rDNA of the chloroplasts, the rbcL large subunit (LSU) sequences of the chloroplasts, and the sterol composition of three different strains of Attheya septentrionalis (Ostrup) R. M. Crawford and one strain of Attheya longicornis R. M. Crawford et C. Gardner. These data were compared with data from more than 100 other diatom species, covering the whole phylogenetic tree, with special emphasis on species belonging to the genera that have been suggested to be related to the genus Attheya. All data suggest that the investigated Attheya species form a separate group of diatoms, and there is no indication that they belong to either the Chaetocerotophycidae or the Biddulphiophycidae. Despite applying these various approaches, we were unable to determine the exact phylogenetic position of the investigated Attheya species within the diatoms.