Get your Journal of Cheminformatics paper right the first time: a ready-made structure with the right abstract and citations, so editors see your science, not formatting slips.
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Authored by Sumalatha Gangadhar | Published on 17 August, 2026
Submitting to Journal of Cheminformatics goes smoothly when your draft already matches the journal's own rules. Editors screen new manuscripts against the Journal of Cheminformatics guide for authors before peer review, so formatting, structure, and required statements should be right on the first draft rather than repaired during upload. This template sets that structure up for you.
It is a manuscript shell aligned to Journal of Cheminformatics. It covers front matter, the abstract the journal expects, a body organized to the journal's article types, and a reference list in the journal's required style. Confirm current scope and article types on the Journal of Cheminformatics journal page before you draft.
Prepare the title, authors, affiliations, and ORCID iDs. Write the abstract to the journal's rule and word limit, organize the body to the article type, and apply the required reference style from the first citation. Complete every declaration (ethics, competing interests, funding, data availability) the Journal of Cheminformatics guide for authors lists, and cite figures and tables in order.
The common failure modes are formatting or reference style that does not match the guide for authors, missing required statements, and an incomplete portal checklist. Clear all three against the Journal of Cheminformatics guide for authors before you submit.
The shell mirrors what editorial staff check first: article-type fit, the abstract rules, required declarations, and the journal's reference style. For more detail see the author resources. When your draft is ready, upload it through the journal's submission system.
| Element | J Cheminformatics requirement |
|---|---|
| Abstract | Research articles: unstructured abstract not exceeding 350 words, must include a section titled 'Scientific Contribution' (maximum 3 sentences) highlighting the scientific contributions that advance the field and differentiate from prior work. Graphical abstract optional (920 x 300 pixels, max 150KB). Brief Reports: abstract word limit not specified separately but article limited to 1,000-1,500 words total. Methodology: unstructured abstract with 'Scientific Contribution' section (3 sentences max), specific word limit not stated. Review articles: abstract summarizes aim/findings, approximately 3000 words for full article, specific abstract word limit not stated. For all types: minimize abbreviations and do not cite references in abstract |
| Main text | Research articles: length and quantity of data not restricted for many article types. Brief Reports: 1,000 to 1,500 words, no more than 25 references. Methodology: no overall limit stated. Review articles: approximately 3000 words. Standard structure for Research articles: Introduction, Results, Discussion (can be combined as Results and Discussion), Conclusions, Methods/Experimental (can also be placed after Introduction) |
| Declarations | Ethics approval/consent as applicable; competing interests; funding; data availability |
| Figures/tables | Publication-ready; cited in order |
| Supplemental | Upload separately when used |
| Keywords | Three to ten keywords representing the main content of the article |
| References | Springer Basic reference style (numbered in order of appearance in text). Format: Author(s) (Year) Title. Journal Volume:Pages. Example: Smith J, Jones M Jr, Houghton L (1999) Future of health insurance. N Engl J Med 965:325-329. DOIs should be included when available. Web links and URLs must be given a reference number and included in the reference list with full details including access date |
| Peer review | Single-anonymous (also known as single-blind): reviewers know the authors' names and affiliations, but reviewer reports provided to authors are anonymous |
| Submission | submission.nature.com/new-submission/13321/3 |
Read the Journal of Cheminformatics guide for authors once before drafting and once before upload. Draft the abstract after results are stable. Set the reference style before adding citations. Keep a cover letter that states your contribution and fit to Journal of Cheminformatics in under a page.
Skim two or three recent J Cheminformatics papers to calibrate depth and figure style. Make the novelty clear in the first two pages. Deposit data and code when the policy on the Journal of Cheminformatics journal page requires it. Disclose any preprint or conference version with identifiers in the cover letter.
Do one focused pass against the Journal of Cheminformatics guide for authors: scope, length, reference style, required declarations, and figure quality. Then submit through the journal's submission system.