Weakly supervised learning and interpretability for endometrial whole slide image diagnosis
TL;DR: This paper applied weakly supervised learning for whole-slide image-based diagnostic tasks in histopathology, with over 85% validation accuracy and over 87% test accuracy, and employed interpretability methods including attention heatmapping, feature visualization, and a novel end-to-end saliency-mapping approach to identify distinct morphologies learned by the model.
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Abstract: Fully supervised learning for whole slide image-based diagnostic tasks in histopathology is problematic due to the requirement for costly and time-consuming manual annotation by experts. Weakly supervised learning that utilizes only slide-level labels during training is becoming more widespread as it relieves this burden, but has not yet been applied to endometrial whole slide images, in iSyntax format. In this work, we apply a weakly supervised learning algorithm to a real-world dataset of this type for the first time, with over 85% validation accuracy and over 87% test accuracy. We then employ interpretability methods including attention heatmapping, feature visualization, and a novel end-to-end saliency-mapping approach to identify distinct morphologies learned by the model and build an understanding of its behavior. These interpretability methods, alongside consultation with expert pathologists, allow us to make comparisons between machine-learned knowledge and consensus in the field. This work contributes to the state of the art by demonstrating a robust practical application of weakly supervised learning on a real-world digital pathology dataset and shows the importance of fine-grained interpretability to support understanding and evaluation of model performance in this high-stakes use case.
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Citations
Role of artificial intelligence in digital pathology for gynecological cancers
Ya-Li Wang,Song Gao,Qian Xiao,Chen Li,Marcin Grzegorzek,Ying-Ying Zhang,Xiao-Han Li,Ye Kang,Fang-Hua Liu,Ting-Ting Gong,Qi-Jun Wu +10 more
TL;DR: This review explores the application of artificial intelligence in digital pathology for gynecological cancers, highlighting its potential in accurate diagnosis, classification, and prognosis prediction, while also discussing challenges and future directions in data acquisition and model optimization.
12
Detection of malignancy in whole slide images of endometrial cancer biopsies using artificial intelligence
Christina Fell,Mahnaz Mohammadi,David Morrison,Ognjen Arandjelovic,S Syed,Prakash Konanahalli,Sarah Bell,Gareth Bryson,David J. Harrison,David Harris-Birtill +9 more
TL;DR: In this paper , a fully supervised convolutional neural network (CNN) model was trained to calculate the probability of a patch from the slide being "malignant" or "other or benign".
Applied artificial intelligence in healthcare: Listening to the winds of change in a post-COVID-19 world
Arash Shaban-Nejad,Martin Michalowski,Simone Bianco,John S. Brownstein,David L. Buckeridge,Rl L. Davis +5 more
TL;DR: In this article , the authors highlight advances in artificial intelligence (AI) technologies in five areas: Collaborative AI, Multimodal AI, Human-Centered AI, Equitable AI and Ethical and Value-based AI in order to cope with future complex socioeconomic and public health issues.
6
Decoding the black box: Explainable AI (XAI) for cancer diagnosis, prognosis, and treatment planning-A state-of-the art systematic review
Yusuf Abas Mohamed,Bee Luan Khoo,Mohd Shahrimie Mohd Asaari,Mohd Ezane Aziz,Fattah Rahiman Ghazali +4 more
Abstract: OBJECTIVE
Explainable Artificial Intelligence (XAI) is increasingly recognized as a crucial tool in cancer care, with significant potential to enhance diagnosis, prognosis, and treatment planning. However, the holistic integration of XAI across all stages of cancer care remains underexplored. This review addresses this gap by systematically evaluating the role of XAI in these critical areas, identifying key challenges and emerging trends.
MATERIALS AND METHODS
Following the PRISMA guidelines, a comprehensive literature search was conducted across Scopus and Web of Science, focusing on publications from January 2020 to May 2024. After rigorous screening and quality assessment, 69 studies were selected for in-depth analysis.
RESULTS
The review identified critical gaps in the application of XAI within cancer care, notably the exclusion of clinicians in 83% of studies, which raises concerns about real-world applicability and may lead to explanations that are technically sound but clinically irrelevant. Additionally, 87% of studies lacked rigorous evaluation of XAI explanations, compromising their reliability in clinical practice. The dominance of post-hoc visual methods like SHAP, LIME and Grad-CAM reflects a trend toward explanations that may be inherently flawed due to specific input perturbations and simplifying assumptions. The lack of formal evaluation metrics and standardization constrains broader XAI adoption in clinical settings, creating a disconnect between AI development and clinical integration. Moreover, translating XAI insights into actionable clinical decisions remains challenging due to the absence of clear guidelines for integrating these tools into clinical workflows.
CONCLUSION
This review highlights the need for greater clinician involvement, standardized XAI evaluation metrics, clinician-centric interfaces, context-aware XAI systems, and frameworks for integrating XAI into clinical workflows for informed clinical decision-making and improved outcomes in cancer care.
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Whole Slide Image Understanding in Pathology: What Is the Salient Scale of Analysis?
Eleanor Jenkinson,Ognjen Arandjelovic +1 more
TL;DR: A patch-based whole slide image analysis method was implemented and it was discovered that the most successful method uses a patch size of 256 × 256 pixels with the informed sampling method, using the location of tumour regions to sample a balanced dataset.
1
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