Journal Article10.1182/BLOOD-2006-04-019927
The cryptic chromosomal deletion del(11)(p12p13) as a new activation mechanism of LMO2 in pediatric T-cell acute lymphoblastic leukemia.
Pieter Van Vlierberghe,Martine van Grotel,H. Berna Beverloo,Charles Lee,Tryggvi Helgason,Jessica G.C.A.M. Buijs-Gladdines,Monique M.C.J. Passier,Elisabeth R. van Wering,Anjo J.P. Veerman,Willem Kamps,Jules P.P. Meijerink,Rob Pieters +11 more
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TL;DR: It is reported that a new recurrent and cryptic deletion on chromosome 11 (del(11)(p12p13)) in about 4% (6/138) of pediatric T-ALL patients is identified, and this deletion activates the LMO2 oncogene in 4 of 6 del( 11)(p 12p13)-positive T-all patients, in the same manner as in patients with an L MO2 translocation.
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About: This article is published in Blood. The article was published on 15 Nov 2006. The article focuses on the topics: Chromosomal Deletion & Acute lymphocytic leukemia.
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Citations
A novel and universal method for microRNA RT-qPCR data normalization
Pieter Mestdagh,Pieter Van Vlierberghe,An-Sofie De Weer,Daniel Muth,Frank Westermann,Frank Speleman,Jo Vandesompele +6 more
TL;DR: It is demonstrated that the mean expression value outperforms the current normalization strategy in terms of better reduction of technical variation and more accurate appreciation of biological changes.
Activation of proto-oncogenes by disruption of chromosome neighborhoods
Denes Hnisz,Abraham S. Weintraub,Daniel S. Day,Anne-Laure Valton,Rasmus O. Bak,Charles H. Li,Johanna Goldmann,Bryan R. Lajoie,Zi Peng Fan,Alla A. Sigova,Jessica Reddy,Diego Borges-Rivera,Tong Ihn Lee,Rudolf Jaenisch,Matthew H. Porteus,Job Dekker,Job Dekker,Richard A. Young +17 more
TL;DR: Insulated neighborhoods in T cell acute lymphoblastic leukemia (T-ALL) are mapped and it is found that tumor cell genomes contain recurrent microdeletions that eliminate the boundary sites of insulated neighborhoods containing prominent T-ALL proto-oncogenes.
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Acute lymphoblastic leukaemia.
TL;DR: Genome-wide profiling of germline and leukaemic cell DNA has identified novel submicroscopic structural genetic changes and sequence mutations that contribute to leukaemogenesis, define new disease subtypes, affect responsiveness to treatment, and might provide novel prognostic markers and therapeutic targets for personalised medicine.
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Activation of proto-oncogenes by disruption of chromosome neighborhoods
Denes Hnisz,Daniel S. Day,Anne-Laure Valton,Rasmus O. Bak,Johanna Goldmann,Bryan R. Lajoie,Alla A. Sigova,Tong Ihn Lee,Matthew H. Porteus,Job Dekker,Abraham S. Weintraub,Charles H. Li,Jessica Reddy,Diego Borges-Rivera,Rudolf Jaenisch,Zi Peng Fan,Richard A. Young +16 more
- 01 Nov 2015
TL;DR: Wala et al. as discussed by the authors investigated whether proto-oncogenes occur within these structures and whether oncogene activation can occur via disruption of insulated neighborhood boundaries in cancer cells.
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The molecular basis of T cell acute lymphoblastic leukemia
TL;DR: This review summarizes recent advances in the understanding of the molecular genetics of T-ALL and defines distinct molecular groups ofT-ALL with specific gene expression signatures and clinicobiological features.
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TL;DR: This article identified 255 loci across the human genome that contain genomic imbalances among unrelated individuals, and revealed that half of these regions overlap with genes, and many coincide with segmental duplications or gaps in human genome assembly.
Activating Mutations of NOTCH1 in Human T Cell Acute Lymphoblastic Leukemia
Andrew P. Weng,Andrew P. Weng,Adolfo A. Ferrando,Adolfo A. Ferrando,Woojoong Lee,Woojoong Lee,John P. Morris,John P. Morris,Lewis B. Silverman,Lewis B. Silverman,Cheryll Sanchez-Irizarry,Cheryll Sanchez-Irizarry,Stephen C. Blacklow,Stephen C. Blacklow,A. Thomas Look,A. Thomas Look,Jon C. Aster,Jon C. Aster +17 more
TL;DR: These findings greatly expand the role of activated NOTCH1 in the molecular pathogenesis of human T-ALL and provide a strong rationale for targeted therapies that interfere with NOTCH signaling.
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Gene expression signatures define novel oncogenic pathways in T cell acute lymphoblastic leukemia
Adolfo A. Ferrando,Donna Neuberg,Jane Staunton,Mignon L. Loh,Christine Huard,Susana C. Raimondi,Fred G. Behm,Ching-Hon Pui,James R. Downing,D. Gary Gilliland,Eric S. Lander,Todd R. Golub,A. Thomas Look +12 more
TL;DR: It is shown that five different T cell oncogenes are often aberrantly expressed in the absence of chromosomal abnormalities, and HOX11L2 activation is identified as a novel event in T cell leukemogenesis.
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