Pseudomonas rhizophila S211, a New Plant Growth-Promoting Rhizobacterium with Potential in Pesticide-Bioremediation.
Wafa Hassen,Mohamed Neifar,Hanene Cherif,Afef Najjari,Habib Chouchane,Rim Chaouachi Driouich,Asma Salah,Fatma Naili,Amor Mosbah,Yasmine Souissi,Noura Raddadi,Hadda Imen Ouzari,Fabio Fava,Ameur Cherif +13 more
TL;DR: Due to its low-cost production, emulsification activities and high performance in solubilization enhancement of chemical pesticides, the indigenous BS-producing PGPR S211 could be used as a promising agent for environmental bioremediation of pesticide-contaminated agricultural soils.
read more
Abstract: A number of Pseudomonas strains function as inoculants for biocontrol, biofertilization, and phytostimulation, avoiding the use of pesticides and chemical fertilizers. Here, we present a new metabolically versatile plant growth-promoting rhizobacterium, Pseudomonas rhizophila S211, isolated from a pesticide contaminated artichoke field that shows biofertilization, biocontrol and bioremediation potentialities. The S211 genome was sequenced, annotated and key genomic elements related to plant growth promotion and biosurfactant (BS) synthesis were elucidated. S211 genome comprises 5,948,515 bp with 60.4% G+C content, 5306 coding genes and 215 RNA genes. The genome sequence analysis confirmed the presence of genes involved in plant-growth promoting and remediation activities such as the synthesis of ACC deaminase, putative dioxygenases, auxin, pyroverdin, exopolysaccharide levan and rhamnolipid BS. BS production by P. rhizophila S211 grown on olive mill wastewater based media was effectively optimized using a central-composite experimental design and response surface methodology (RSM). The optimum conditions for maximum BS production yield (720.80 ± 55.90 mg/L) were: 0.5% (v/v) inoculum size, 15% (v/v) olive oil mill wastewater (OMWW) and 40°C incubation temperature at pH 6.0 for 8 days incubation period. Biochemical and structural characterization of S211 BS by chromatography and spectroscopy studies suggested the glycolipid nature of the BS. P. rhizophila rhamnolipid was stable over a wide range of temperature (40-90°C), pH (6-10), and salt concentration (up to 300 mM NaCl). Due to its low-cost production, emulsification activities and high performance in solubilization enhancement of chemical pesticides, the indigenous BS-producing PGPR S211 could be used as a promising agent for environmental bioremediation of pesticide-contaminated agricultural soils.
read more
Chat with Paper
AI Agents for this Paper
Find similar papers on Google Scholar, PubMed and Arxiv
Write a critical review of this paper
Analyze citations of this paper to find unaddressed research gaps
Citations
PGPR-mediated induction of systemic resistance and physiochemical alterations in plants against the pathogens: Current perspectives.
Mukesh Meena,Mukesh Meena,Prashant Swapnil,Prashant Swapnil,Kumari Divyanshu,Sunil Kumar,Harish,Yashoda Nandan Tripathi,Andleeb Zehra,Avinash Marwal,Ram Sanmukh Upadhyay +10 more
TL;DR: The PGPR‐mediated innovative methods are discussed, focusing on the mode of action of compounds authorized that may be significant in the development contributing to enhance plant growth, disease resistance, and serve as an efficient bioinoculants for sustainable agriculture.
258
Preparation, characterization and application of biosurfactant in various industries: A critical review on progress, challenges and perspectives
TL;DR: In this paper, a review comprehensively discusses recent applications of biosurfactants, their preparation, characterization, and potential environmental and other industrial applications, including recombinant DNA technology, mutants and hyperactive microbes.
88
Biosurfactants: the next generation biomolecules for diverse applications
Geeta Rawat,Anupam Dhasmana,Vivek Kumar +2 more
- 01 Dec 2020
TL;DR: In this paper, a review of the distinctive features of biosurfactants and future challenges and research opportunities are discussed, as well as the potential of using them in different ways.
52
Bacterial remediation of pesticide polluted soils: Exploring the feasibility of site restoration.
Priyanka Bokade,Vivek Kumar Gaur,Varsha Tripathi,Shishir Bobate,Natesan Manickam,Abhay Bajaj +5 more
TL;DR: In this paper , a review of the feasibility for restoring and reclaiming pesticide contaminated sites along with the ecotoxicological risk assessments is presented, highlighting the need to fine-tune the available processes and employ interdisciplinary approaches to make microbe assisted bioremediation as the method of choice for reclamation of contaminated sites.
51
Integration of Green Economy Concepts for Sustainable Biosurfactant Production - A Review.
Chiamaka Linda Mgbechidinma,Otobong Donald Akan,Chunfang Zhang,Mengzhen Huang,Nsemeke Linus,He Zhu,Sherifah Monilola Wakil +6 more
TL;DR: In this paper , a review of green economy concepts integration with sustainable biosurfactant production and its application in health-related industries is presented, including its limitations, techno-economic assessment, market evaluations, possible roadblocks, and future directions.
51
References
KEGG: Kyoto Encyclopedia of Genes and Genomes
Minoru Kanehisa,Susumu Goto +1 more
TL;DR: The Kyoto Encyclopedia of Genes and Genomes (KEGG) as discussed by the authors is a knowledge base for systematic analysis of gene functions in terms of the networks of genes and molecules.
Prokka: Rapid Prokaryotic Genome Annotation
TL;DR: Prokka is introduced, a command line software tool to fully annotate a draft bacterial genome in about 10 min on a typical desktop computer, and produces standards-compliant output files for further analysis or viewing in genome browsers.
•Book
Response Surface Methodology: Process and Product Optimization Using Designed Experiments
Raymond H. Myers,Douglas C. Montgomery +1 more
- 29 Aug 1995
TL;DR: Using a practical approach, this book discusses two-level factorial and fractional factorial designs, several aspects of empirical modeling with regression techniques, focusing on response surface methodology, mixture experiments and robust design techniques.
11.2K
The RAST Server: Rapid Annotations using Subsystems Technology
Ramy K. Aziz,Ramy K. Aziz,Daniela Bartels,Aaron A. Best,Matthew DeJongh,Terrence Disz,Terrence Disz,Robert Edwards,Kevin Formsma,Svetlana Gerdes,Elizabeth M. Glass,Michael Kubal,Folker Meyer,Folker Meyer,Gary J. Olsen,Gary J. Olsen,Robert Olson,Robert Olson,Andrei L. Osterman,Ross Overbeek,Leslie Klis McNeil,Daniel Paarmann,Tobias Paczian,Bruce Parrello,Gordon D. Pusch,Claudia I. Reich,Rick Stevens,Rick Stevens,Olga Vassieva,Veronika Vonstein,Andreas Wilke,Olga Zagnitko +31 more
TL;DR: A fully automated service for annotating bacterial and archaeal genomes that identifies protein-encoding, rRNA and tRNA genes, assigns functions to the genes, predicts which subsystems are represented in the genome, uses this information to reconstruct the metabolic network and makes the output easily downloadable for the user.
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
Todd M. Lowe,Sean R. Eddy +1 more
TL;DR: A program is described, tRNAscan-SE, which identifies 99-100% of transfer RNA genes in DNA sequence while giving less than one false positive per 15 gigabases.
10.9K