Prognostic utility and characterization of cell-free DNA in patients with severe sepsis
Dhruva J. Dwivedi,Lisa J. Toltl,Laura L. Swystun,Janice Pogue,Janice Pogue,Kao-Lee Liaw,Jeffrey I. Weitz,Deborah J. Cook,Deborah J. Cook,Alison Fox-Robichaud,Patricia C. Liaw +10 more
TL;DR: These studies suggest that cfDNA provides high prognostic accuracy in patients with severe sepsis, and suggest that the combination of cfDNA with protein C and MODS scores may yield even stronger predictive power.
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Abstract: Although sepsis is the leading cause of death in noncoronary critically ill patients, identification of patients at high risk of death remains a challenge. In this study, we examined the incremental usefulness of adding multiple biomarkers to clinical scoring systems for predicting intensive care unit (ICU) mortality in patients with severe sepsis. This retrospective observational study used stored plasma samples obtained from 80 severe sepsis patients recruited at three tertiary hospital ICUs in Hamilton, Ontario, Canada. Clinical data and plasma samples were obtained at study inclusion for all 80 patients, and then daily for 1 week, and weekly thereafter for a subset of 50 patients. Plasma levels of cell-free DNA (cfDNA), interleukin 6 (IL-6), thrombin, and protein C were measured and compared with clinical characteristics, including the primary outcome of ICU mortality and morbidity measured with the Multiple Organ Dysfunction (MODS) score and Acute Physiology and Chronic Health Evaluation (APACHE) II scores. The level of cfDNA in plasma at study inclusion had better prognostic utility than did MODS or APACHE II scores, or the biomarkers measured. The area under the receiver operating characteristic (ROC) curves for cfDNA to predict ICU mortality is 0.97 (95% CI, 0.93 to 1.00) and to predict hospital mortality is 0.84 (95% CI, 0.75 to 0.94). We found that a cfDNA cutoff value of 2.35 ng/μl had a sensitivity of 87.9% and specificity of 93.5% for predicting ICU mortality. Sequential measurements of cfDNA suggested that ICU mortality may be predicted within 24 hours of study inclusion, and that the predictive power of cfDNA may be enhanced by combining it with protein C levels or MODS scores. DNA-sequence analyses and studies with Toll-like receptor 9 (TLR9) reporter cells suggests that the cfDNA from sepsis patients is host derived. These studies suggest that cfDNA provides high prognostic accuracy in patients with severe sepsis. The serial data suggest that the combination of cfDNA with protein C and MODS scores may yield even stronger predictive power. Incorporation of cfDNA in sepsis risk-stratification systems may be valuable for clinical decision making or for inclusion into sepsis trials.
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Citations
Identification of tissue-specific cell death using methylation patterns of circulating DNA.
Roni Lehmann-Werman,Daniel Neiman,Hai Zemmour,Joshua Moss,Judith Magenheim,Adi Vaknin-Dembinsky,Sten Rubertsson,Bengt Nellgård,Kaj Blennow,Henrik Zetterberg,Henrik Zetterberg,Kirsty L. Spalding,Michael J. Haller,Clive Wasserfall,Desmond A. Schatz,Carla J. Greenbaum,Craig Dorrell,Markus Grompe,Aviad Zick,Ayala Hubert,Myriam Maoz,Volker Fendrich,Detlef K. Bartsch,Talia Golan,Shmuel Ben Sasson,Gideon Zamir,Aharon Razin,Howard Cedar,A. M. James Shapiro,Benjamin Glaser,Ruth Shemer,Yuval Dor +31 more
TL;DR: The tissue origins of cfDNA and thus the rate of death of specific cell types can be determined in humans, offering a minimally invasive window for diagnosing and monitoring a broad spectrum of human pathologies as well as providing a better understanding of normal tissue dynamics.
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Circulating cell free DNA: Preanalytical considerations.
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TL;DR: This review examines the preanalytical parameters potentially affecting ccfDNA concentration and fragmentation at each pre Analytical step from blood drawing to the storage of c cfDNA extracts and determined the optimal preanalytic protocols for ccf DNA analysis.
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References
The meaning and use of the area under a receiver operating characteristic (ROC) curve.
TL;DR: A representation and interpretation of the area under a receiver operating characteristic (ROC) curve obtained by the "rating" method, or by mathematical predictions based on patient characteristics, is presented and it is shown that in such a setting the area represents the probability that a randomly chosen diseased subject is (correctly) rated or ranked with greater suspicion than a random chosen non-diseased subject.
21.8K
APACHE II: a severity of disease classification system.
TL;DR: The form and validation results of APACHE II, a severity of disease classification system that uses a point score based upon initial values of 12 routine physiologic measurements, age, and previous health status, are presented.
15.9K
APACHE II-A Severity of Disease Classification System: Reply
TL;DR: The form and validation results of APACHE II, a severity of disease classification system, are presented, showing an increasing score was closely correlated with the subsequent risk of hospital death for 5815 intensive care admissions from 13 hospitals.
14.3K
Bacterial biofilms : A common cause of persistent infections
TL;DR: Improvements in understanding of the genetic and molecular basis of bacterial community behavior point to therapeutic targets that may provide a means for the control of biofilm infections.
Surviving sepsis campaign: international guidelines for management of severe sepsis and septic shock: 2012.
R. P. Dellinger,Mitchell M. Levy,Andrew Rhodes,Djillali Annane,Herwig Gerlach,Steven M. Opal,Jonathan E. Sevransky,Charles L. Sprung,Ivor S. Douglas,Roman Jaeschke,Tiffany M. Osborn,Mark E. Nunnally,Konrad Reinhart,Ruth M. Kleinpell,Derek C. Angus,Clifford S. Deutschman,Flávia Ribeiro Machado,Gordon D. Rubenfeld,Steven A R Webb,Richard Beale,Jean Louis Vincent,Rui Moreno +21 more
TL;DR: An update to the “Surviving Sepsis Campaign Guidelines for Management of Severe Sepsis and Septic Shock,” last published in 2008 is provided.
11.2K