Network integration of parallel metabolic and transcriptional data reveals metabolic modules that regulate macrophage polarization.
Abhishek K. Jha,Stanley Ching-Cheng Huang,Alexey Sergushichev,Alexey Sergushichev,Vicky Lampropoulou,Yulia Ivanova,Ekaterina Loginicheva,Karina Chmielewski,Kelly M. Stewart,Juliet Ashall,Bart Everts,Edward J. Pearce,Edward M. Driggers,Maxim N. Artyomov +13 more
TL;DR: An integrated high-throughput transcriptional-metabolic profiling and analysis pipeline provides a highly integrated picture of the physiological modules supporting macrophage polarization, identifying potential pharmacologic control points for both macrophages.
read more
About: This article is published in Immunity. The article was published on 17 Mar 2015. and is currently open access. The article focuses on the topics: Macrophage polarization.
read more
Chat with Paper
AI Agents for this Paper
Find similar papers on Google Scholar, PubMed and Arxiv
Write a critical review of this paper
Analyze citations of this paper to find unaddressed research gaps
Citations
Triacylglycerol synthesis enhances macrophage inflammatory function
Angela Castoldi,Lauar B. Monteiro,Nikki van Teijlingen Bakker,Nikki van Teijlingen Bakker,David E. Sanin,Nisha Rana,Mauro Corrado,Alanna M. Cameron,Fabian Hässler,Mai Matsushita,George Caputa,Ramon I. Klein Geltink,Jörg Büscher,Joy Edwards-Hicks,Erika L. Pearce,Edward J. Pearce,Edward J. Pearce +16 more
TL;DR: It is shown that macrophages stimulated with lipopolysaccharide plus interferon-γ (IFNγ) accumulate TGs in LDs, and long-chain acylcarnitine levels, placing LDs in a position of central functional importance in inflammatory macrophage function.
121
Two-stage metabolic remodelling in macrophages in response to lipopolysaccharide and interferon-γ stimulation.
Gretchen L. Seim,Gretchen L. Seim,Emily C. Britt,Emily C. Britt,Steven V. John,Steven V. John,Franklin J. Yeo,Aaron R. Johnson,Richard S. Eisenstein,Richard S. Eisenstein,David J. Pagliarini,David J. Pagliarini,Jing Fan,Jing Fan +13 more
- 01 Jul 2019
TL;DR: This study elucidates a dynamic and mechanistic picture of metabolic reprogramming in LPS and interferon-γ stimulated macrophages, and provides insights into how changing metabolism can regulate the functional transitions in macrophage over a course of immune response.
121
Metabolic Regulation of Adipose Tissue Macrophage Function in Obesity and Diabetes.
TL;DR: This review focuses on the role of macrophages in AT inflammation and obesity, and the metabolic changes in macrophage function that occur with activation that underpin their role in the pathogenesis of IR and T2D.
120
Nuclear Receptor Nur77 Limits the Macrophage Inflammatory Response through Transcriptional Reprogramming of Mitochondrial Metabolism
Duco S. Koenis,Lejla Medzikovic,Pieter B. van Loenen,Michel van Weeghel,Stephan Huveneers,Mariska Vos,Ingrid Johanna Evers-van Gogh,Jan Van den Bossche,Dave Speijer,Yongsoo Kim,Lodewyk F. A. Wessels,Noam Zelcer,Wilbert Zwart,Eric Kalkhoven,Carlie J.M. de Vries +14 more
TL;DR: Nr4a1 induces an anti-inflammatory metabolic state in macrophages that protects against chronic inflammatory diseases such as atherosclerosis.
120
Mechanisms of Macrophage Polarization in Insulin Signaling and Sensitivity.
TL;DR: The known homeostatic functions of tissue macrophages in insulin secreting and major insulin sensitive tissues are described and the known mechanisms of aberrant macrophage activation in these tissues and the ways in which this leads to impairment of insulin sensitivity/secretion and the development of T2D are highlighted.
References
Differential expression analysis for sequence count data.
Simon Anders,Wolfgang Huber +1 more
TL;DR: A method based on the negative binomial distribution, with variance and mean linked by local regression, is proposed and an implementation, DESeq, as an R/Bioconductor package is presented.
•Book
Principles of Biochemistry
Albert L. Lehninger
- 01 Jan 1937
TL;DR: The third edition, coming ten years after the first, emphasizes both the flowering of biochemical research and the prodigious effort by busy teachers and scientists to keep up to date this popular text and reference.
6K
Macrophage plasticity and polarization: in vivo veritas
Antonio Sica,Alberto Mantovani +1 more
TL;DR: The identification of mechanisms and molecules associated with macrophage plasticity and polarized activation provides a basis for Macrophage-centered diagnostic and therapeutic strategies.
KEGG for integration and interpretation of large-scale molecular data sets
TL;DR: KEGG Mapper, a collection of tools for KEGG PATHWAY, BRITE and MODULE mapping, enabling integration and interpretation of large-scale data sets and recent enhancements to the K EGG content, especially the incorporation of disease and drug information used in practice and in society, to support translational bioinformatics.
Protective and pathogenic functions of macrophage subsets
Peter J. Murray,Thomas A. Wynn +1 more
TL;DR: The four stages of orderly inflammation mediated by macrophages are discussed: recruitment to tissues; differentiation and activation in situ; conversion to suppressive cells; and restoration of tissue homeostasis.
Related Papers (5)
Gillian M. Tannahill,Anne M. Curtis,Juraj Adamik,Eva M. Palsson-McDermott,Anne F. McGettrick,Gautam Goel,Christian Frezza,Nicholas J. Bernard,Beth Kelly,Niamh Foley,Liang Zheng,A. Gardet,Zhen Tong,S. S. Jany,Sinéad C. Corr,Moritz Haneklaus,Brian E. Caffrey,Kerry A. Pierce,Sarah R. Walmsley,F. C. Beasley,Eoin P. Cummins,Victor Nizet,Moira K. B. Whyte,Cormac T. Taylor,Hening Lin,Seth L. Masters,Eyal Gottlieb,Vincent P. Kelly,Clary B. Clish,Philip E. Auron,Ramnik J. Xavier,Ramnik J. Xavier,Luke A. J. O'Neill +32 more
Evanna L. Mills,Beth Kelly,Angela Logan,Ana S. H. Costa,Mukund Varma,Clare E. Bryant,Panagiotis Tourlomousis,J. Henry M. Däbritz,Eyal Gottlieb,Isabel J. Latorre,Sinéad C. Corr,Gavin J. McManus,Dylan G. Ryan,Howard T. Jacobs,Howard T. Jacobs,Marten Szibor,Marten Szibor,Marten Szibor,Ramnik J. Xavier,Thomas Braun,Christian Frezza,Michael P. Murphy,Luke A. J. O'Neill +22 more