Book Chapter10.1007/978-1-59745-290-8_8
Machine-Learning Techniques
Rob Sullivan
- 01 Jan 2012
- pp 363-454
132
TL;DR: These two broad classifications of machine-learning methods will ground us as the authors discuss a broad range of techniques and where they are currently being applied in life sciences research, expanding their toolkit and enabling us to take a very different path in their analysis efforts.
read more
Abstract: Our ultimate objective in data mining is to identify any hidden patterns or relationships between our data elements, and in one sense, machine learning provides us with a set of techniques to do just that: techniques that allow us to learn the patterns without any outside influence (unsupervised learning). However, just as is the case with anything, that power comes at a price, but the results can be very interesting and very significant. In other cases, we have some sense on what the results should be and so can guide the learning techniques through an initial “training” phase, directing our system and honing the results (supervised learning). These two broad classifications of machine-learning methods will ground us as we discuss a broad range of techniques and where they are currently being applied in life sciences research, expanding our toolkit and enabling us to take a very different path in our analysis efforts: using an artificial intelligence discipline and letting the data tell us what it contains. As datasets grow, these techniques become more important.
read more
Chat with Paper
AI Agents for this Paper
Find similar papers on Google Scholar, PubMed and Arxiv
Write a critical review of this paper
Analyze citations of this paper to find unaddressed research gaps
Citations
Molecular Breeding Strategy and Challenges Towards Improvement of Blast Disease Resistance in Rice Crop
Sadegh Ashkani,Mohd Y. Rafii,Mahmoodreza Shabanimofrad,Gous Miah,Mahbod Sahebi,Parisa Azizi,Fatah A. Tanweer,Mohd Sayeed Akhtar,Abbas Nasehi +8 more
TL;DR: This review includes examples of how advanced molecular method have been used in breeding programs for improving blast resistance, allowing rapid introgression of disease resistance genes into susceptible varieties as well as the incorporation of multiple genes into individual lines for more durable blast resistance.
Application of artificial intelligence models and optimization algorithms in plant cell and tissue culture
TL;DR: Artificial intelligence models and optimization algorithms can be considered a novel and reliable computational method in plant tissue culture.
166
A New Ensemble-Based Intrusion Detection System for Internet of Things
Adeel Abbas,Muazzam A. Khan,Muazzam A. Khan,Shahid Latif,Maria Ajaz,Awais Aziz Shah,Jawad Ahmad +6 more
TL;DR: An ensemble-based intrusion detection model that combines logistic regression, naive Bayes, and decision tree have been deployed with voting classifier after analyzing model’s performance with some prominent existing state-of-the-art techniques and results illustrate significant improvement in terms of accuracy as compared to existing models.
Combining hyper-resolution land surface modeling with SMAP brightness temperatures to obtain 30-m soil moisture estimates
Noemi Vergopolan,Nathaniel W. Chaney,Hylke E. Beck,Ming Pan,Justin Sheffield,Steven Chan,Eric F. Wood +6 more
TL;DR: In this paper, the authors presented a merging framework that combines a hyper-resolution land surface model (LSM), a radiative transfer model (RTM), and a Bayesian scheme to merge and downscale coarse resolution remotely sensed hydrological variables to a 30m spatial resolution.
121
Support vector regression optimized by meta-heuristic algorithms for daily streamflow prediction
TL;DR: Support vector regression was optimized by six meta-heuristic algorithms to predict daily streamflow in Naula watershed, State of Uttarakhand, India and it was demonstrated that SVR-HHO during calibration/validation periods had superior performance to the other meta- heuristic algorithms in terms of prediction accuracy.
119
References
Boolean algebra and compression technique for association rule mining
Somboon Anekritmongkol,M. L. Kulthon Kasamsan +1 more
- 19 Nov 2010
TL;DR: In this article, the authors proposed a new algorithm that will work rapidly and reduce the amount of time to read data from the database by combining, compressing, generating candidate item set and counting the number of candidates.
2
Learning to construct knowledge bases from the World Wide Web
Mark Craven,Daniel DiPasquo,Dayne Freitag,Andrew McCallum,Tom M. Mitchell,Kamal Nigam,Seán Slattery +6 more
TL;DR: The goal of the research described here is to automatically create a computer understandable knowledge base whose content mirrors that of the World Wide Web, and several machine learning algorithms for this task are described, and promising initial results with a prototype system that has created a knowledge base describing university people, courses, and research projects.
Strategies for Network Motifs Discovery
Pedro Ribeiro,Fernando Silva,Marcus Kaiser +2 more
- 09 Dec 2009
TL;DR: A review and runtime comparison of current motif detection algorithms in the field and categorize the algorithms outlining the main differences and advantages of each strategy to allow a fair and objective efficiency comparison using a set of benchmark networks.
Comparative Gene Expression Analysis by a Differential Clustering Approach: Application to the Candida albicans Transcription Program
TL;DR: This study systematically compared the transcription program of the fungal pathogen Candida albicans with that of the model organism Saccharomyces cerevisiae and revealed differences related to the differential requirement for mitochondrial function in the two yeasts.
Parallelization of spectral clustering algorithm on multi-core processors and GPGPU
Jing Zheng,Wenguang Chen,Yurong Chen,Yimin Zhang,Ying Zhao,Weimin Zheng +5 more
- 16 Sep 2008
TL;DR: Two versions of implementation ofSpectral clustering are provided: one is parallelized in OpenMP; the other is programmed in the NVIDIA CUDA (compute unified device architecture), which is the environment provided by NVIDIA to program on its CUDA-Enabled GPGPUs (general-purpose graphic processing unit).
Related Papers (5)
Y. Yang
- 20 Nov 2018
Michael N. Johnstone,Matthew Peacock +1 more
- 01 Jan 2020
Rob Sullivan
- 01 Jan 2012