Journal Article10.1016/0378-4371(92)90497-E
Fractal landscapes in biological systems: long-range correlations in DNA and interbeat heart intervals.
H. E. Stanley,Sergey V. Buldyrev,Ary L. Goldberger,Jeffrey M. Hausdorff,Shlomo Havlin,Shlomo Havlin,Joseph E. Mietus,Chung-Kang Peng,Francesco Sciortino,Michael Simons,Michael Simons +10 more
TL;DR: It is found that under normal conditions, beat-to-beat fluctuations in heart rate display long-range power law correlations, consistent with the intron-late hypothesis of gene evolution.
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Abstract: Here we discuss recent advances in applying ideas of fractals and disordered systems to two topics of biological interest, both topics having in common the appearance of scale-free phenomena, i.e., correlations that have no characteristic length scale, typically exhibited by physical systems near a critical point and dynamical systems far from equilibrium. (i) DNA nucleotide sequences have traditionally been analyzed using models which incorporate the possibility of short-range nucleotide correlations. We found, instead, a remarkably long-range power law correlation. We found such long-range correlations in intron-containing genes and in non-transcribed regulatory DNA sequences as well as intragenomic DNA, but not in cDNA sequences or intron-less genes. We also found that the myosin heavy chain family gene evolution increases the fractal complexity of the DNA landscapes, consistent with the intron-late hypothesis of gene evolution. (ii) The healthy heartbeat is traditionally thought to be regulated according to the classical principle of homeostasis, whereby physiologic systems operate to reduce variability and achieve an equilibrium-like state. We found, however, that under normal conditions, beat-to-beat fluctuations in heart rate display long-range power law correlations.
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Citations
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Statistical and linguistic features of DNA sequences.
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TL;DR: Evidence is presented supporting the idea that the DNA sequence in genes containing noncoding regions is correlated, and that the correlation is remarkably long range--indeed, base pairs thousands of base pairs distant are correlated.
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Long-range correlations in nucleotide sequences
Chung-Kang Peng,Sergey V. Buldyrev,Ary L. Goldberger,Shlomo Havlin,Shlomo Havlin,Francesco Sciortino,Michael Simons,Michael Simons,H. E. Stanley +8 more
TL;DR: This work proposes a method for studying the stochastic properties of nucleotide sequences by constructing a 1:1 map of the nucleotide sequence onto a walk, which it refers to as a 'DNA walk', and uncovers a remarkably long-range power law correlation.
1.5K
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