Current perspectives in proteomic analysis of abiotic stress in Grapevines
Iniga S. George,Paul A. Haynes +1 more
TL;DR: The completion of the initial grape genome sequence in 2007 has led to a significant increase in research on grapes using proteomics approaches, and some areas with promising scope for potential future research are discussed.
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Abstract: Grapes are an important crop plant which forms the basis of a globally important industry. Grape and wine production is particularly vulnerable to environmental and climatic fluctuations, which makes it essential for us to develop a greater understanding of the molecular level responses of grape plants to various abiotic stresses. The completion of the initial grape genome sequence in 2007 has led to a significant increase in research on grapes using proteomics approaches. In this article, we discuss some of the current research on abiotic stress in grapevines, in the context of abiotic stress research in other plant species. We also highlight some of the current limitations in grapevine proteomics and identify areas with promising scope for potential future research.
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Molecular Tools for Adapting Viticulture to Climate Change
TL;DR: The current knowledge on gene expression is continuously evolving with increasing evidence of the role of alternative splicing, small RNAs, long non-coding RNAs or chromatin activity in grapevine adaptation to climate change as discussed by the authors.
Proteomic variation in Vitis amurensis and V. vinifera buds during cold acclimation
Valerie Farai Masocha,Qingyun Li,Qingyun Li,Zhenfei Zhu,Fengmei Chai,Xiaoming Sun,Zemin Wang,Long Yang,Qing-Feng Wang,Haiping Xin +9 more
TL;DR: New insights are provided into the mechanisms by which cold hardiness is achieved in V. amurensis buds, and the transcriptional changes of 12 genes encoding selected DAPs were consistent with the changes observed at the protein level.
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•Dissertation
Génomique comparative et fonctionnelle de familles de gènes liés au métabolisme secondaire de la vigne (Vitis vinifera) et de ses proches parents
Gautier Arista
- 31 Jan 2017
TL;DR: La vigne (Vitis vinifera) possede un metabolisme secondaire particulierement riche donnant naissance a une large palette of molecules dont certaines sont impliquees dans les defenses contre les pathogenes et d'autres dans la grande diversite d’aromes qui fait la renommee des vins.
Three-Dimensional Multiphoton Imaging of Transcription Factor by ClearSee.
Yoko Mizuta,Katsutoshi Tsuda +1 more
TL;DR: Three-dimensional imaging of fluorescent-protein-fused transcription factors by two-photon excitation microscopy in Arabidopsis and rice is provided to understand their functions during development.
6
Identification of aluminum-resistant miRNAs and lncRNAs in Vitis quinquangularis and exploration of the related aluminum-tolerance mechanisms
Q.S. Jiang,Ya-Sheng Luo,Ling-Hui Chen,XueRong Yang,Xiaolin Liu,Lin You,Jing Wen Tian,Jie Zhu,Dong Duan +8 more
TL;DR: Wang et al. as mentioned in this paper found that miRNAs were involved in the transport and degradation of misfolded proteins in the endoplasmic reticulum (ER), thereby maintaining the functional stability of the ER under abiotic stress.
4
References
Algebraic correction methods for computational assessment of clone overlaps in DNA fingerprint mapping.
TL;DR: A straightforward algebraic correction procedure is proposed, which takes the Sulston score as a provisional value and applies a power-law equation to obtain an improved result, which provides a vastly improved probabilistic description of hypothesized clone overlaps.
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
Olivier Jaillon,Jean-Marc Aury,Benjamin Noel,Alberto Policriti,Christian Clepet,Alberto Casagrande,Nathalie Choisne,Sébastien Aubourg,Nicola Vitulo,Claire Jubin,Alessandro Vezzi,Fabrice Legeai,Philippe Hugueney,Corinne Dasilva,David S. Horner,Erica Mica,Delphine Jublot,Julie Poulain,Clémence Bruyère,Alain Billault,Béatrice Segurens,Michel Gouyvenoux,Edgardo Ugarte,Federica Cattonaro,Véronique Anthouard,Virginie Vico,Cristian Del Fabbro,Michael Alaux,Gabriele Di Gaspero,Vincent Dumas,Nicoletta Felice,Sophie Paillard,Irena Juman,Marco Moroldo,Simone Scalabrin,Aurélie Canaguier,Isabelle Le Clainche,G Malacrida,Eléonore Durand,Graziano Pesole,Valérie Laucou,Philippe Chatelet,Didier Merdinoglu,Massimo Delledonne,Mario Pezzotti,Alain Lecharny,Claude Scarpelli,François Artiguenave,M. Enrico Pè,Giorgio Valle,Michele Morgante,Michel Caboche,Anne-Françoise Adam-Blondon,Jean Weissenbach,Francis Quetier,Patrick Wincker +55 more
TL;DR: A high-quality draft of the genome sequence of grapevine is obtained from a highly homozygous genotype, revealing the contribution of three ancestral genomes to the grapevine haploid content and explaining the chronology of previously described whole-genome duplication events in the evolution of flowering plants.
Climate Change and Global Wine Quality
TL;DR: This article showed that the impacts of climate change are not likely to be uniform across all varieties and regions, and that future climate change will exceed a threshold such that the ripening of balanced fruit required for existing varieties and wine styles will become progressively more difficult.
1.1K
A High Quality Draft Consensus Sequence of the Genome of a Heterozygous Grapevine Variety
Riccardo Velasco,Andrey Zharkikh,Michela Troggio,Dustin Cartwright,Alessandro Cestaro,Dmitry Pruss,Massimo Pindo,Lisa M. Fitzgerald,Silvia Vezzulli,Julia Reid,Giulia Malacarne,Diana Iliev,G. Coppola,Bryan Wardell,Diego Micheletti,Teresita Macalma,Marco Facci,J.T. Mitchell,Michele Perazzolli,Glenn Eldredge,Pamela Gatto,Rozan Oyzerski,Marco Moretto,N. Gutin,Marco Stefanini,Yang Chen,C. Segala,Christine Davenport,Lorenzo Dematte,Amy Mraz,Juri Battilana,Keith E. Stormo,Fabrizio Costa,Quanzhou Tao,Azeddine Si-Ammour,Tim Harkins,Angie Lackey,Clotilde Perbost,Bruce E Taillon,Alessandra Stella,Victor V. Solovyev,Jeffrey A. Fawcett,Lieven Sterck,Klaas Vandepoele,Stella M. Grando,Stefano Toppo,Claudio Moser,Jerry S. Lanchbury,Robert Bogden,Mark H. Skolnick,Vittorio Sgaramella,Satish Bhatnagar,Paolo Fontana,Alexander Gutin,Yves Van de Peer,Francesco Salamini,Roberto Viola +56 more
TL;DR: A high quality draft genome sequence of a cultivated clone of V. vinifera Pinot Noir provides candidate genes implicated in traits relevant to grapevine cultivation, such as those influencing wine quality, via secondary metabolites, and those connected with the extreme susceptibility of grape to pathogens.
Climate change, wine, and conservation
Lee Hannah,Lee Hannah,Patrick R. Roehrdanz,Makihiko Ikegami,Anderson Shepard,M. Rebecca Shaw,Gary M. Tabor,Lu Zhi,Pablo A. Marquet,Robert J. Hijmans +9 more
TL;DR: It is demonstrated that, on a global scale, the impacts of climate change on viticultural suitability are substantial, leading to possible conservation conflicts in land use and freshwater ecosystems.