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Create Interactive Web Graphics via Plotly's JavaScript GraphingLibrary
Carson Sievert,Chris Parmer,Toby Dylan Hocking,Scott Chamberlain,Karthik Ram,Marianne Corvellec,Pedro Despouy +6 more
- 20 Dec 2015
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About: The article was published on 20 Dec 2015. and is currently open access. The article focuses on the topics: Web page & Ajax.
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Citations
Single sample scoring of molecular phenotypes
Momeneh Foroutan,Momeneh Foroutan,Dharmesh D. Bhuva,Dharmesh D. Bhuva,Ruqian Lyu,Kristy A. Horan,Joseph Cursons,Joseph Cursons,Melissa J. Davis,Melissa J. Davis +9 more
TL;DR: The singscore method functions independent of sample composition in gene expression data and thus it provides stable scores, which are particularly useful for small data sets or data integration, and includes a suite of powerful visualization functions to assist in the interpretation of results.
Exploring the single-cell RNA-seq analysis landscape with the scRNA-tools database.
TL;DR: The scRNA-tools database is created to catalogue and curate analysis tools as they become available, and sees that many tools perform tasks specific to sc RNA-seq analysis, particularly clustering and ordering of cells.
QMEC: a tool for high-throughput quantitative assessment of microbial functional potential in C, N, P, and S biogeochemical cycling
TL;DR: QMEC enabled the simultaneous qualitative and quantitative determination of 72 genes from 72 samples in one run, which is promising for comprehensively investigating microbially mediated ecological processes and biogeochemical cycles in various environmental contexts including those of the current global change.
Collision cross section compendium to annotate and predict multi-omic compound identities.
Jaqueline A. Picache,Bailey S. Rose,Andrzej Balinski,Katrina L. Leaptrot,Stacy D. Sherrod,Jody C. May,John A. McLean +6 more
TL;DR: The Unified Compendium is an online interactive tool that utilizes ion mobility collision cross sections to annotate biochemical molecules.
DEBrowser: interactive differential expression analysis and visualization tool for count data
TL;DR: DEBrowser is a flexible, intuitive, web-based analysis platform that enables an iterative and interactive analysis of count data without any requirement of programming knowledge.
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