Journal Article10.1016/J.AB.2009.03.007
CotQuest: Improved algorithm and software for nonlinear regression analysis of DNA reassociation kinetics data
TL;DR: A new nonlinear regression procedure for analysis of Cot data is reported and a novel algorithm to step through a sequence of progressively more complex models is employed, with the results from a given analysis being used to generate starting values for the next model.
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About: This article is published in Analytical Biochemistry. The article was published on 15 May 2009. The article focuses on the topics: Model selection & Cot analysis.
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Citations
Characterization of the genome of bald cypress
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The chromosomal distribution of repetitive DNA sequences in Chrysanthemum boreale revealed a characterization in its genome
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TL;DR: FISH was performed by using the mitotic metaphase chromosome of C. boreale with well-identified repeats and C 0 t DNA as probes to map the repetitive sequences of Chrysanthemum boreale.
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TL;DR: Insight into LP evolution is provided and ongoing efforts to produce a reference genome sequence for LP are informed, while characterization of genes involved in cell wall production highlights carbon metabolism pathways that can be leveraged for increasing wood production.
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References
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Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach
Kenneth P. Burnham,David E. Anderson +1 more
- 19 Jun 2013
TL;DR: The second edition of this book is unique in that it focuses on methods for making formal statistical inference from all the models in an a priori set (Multi-Model Inference).
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The Complete Genome Sequence of Escherichia coli K-12
Frederick R. Blattner,Guy Plunkett,Craig A. Bloch,Nicole T. Perna,Valerie Burland,Monica Riley,Julio Collado-Vides,Jeremy D. Glasner,Christopher K. Rode,George F. Mayhew,Jason Gregor,Nelson Wayne Davis,Heather A. Kirkpatrick,Michael A. Goeden,Debra J. Rose,Bob Mau,Ying Shao +16 more
TL;DR: The 4,639,221-base pair sequence of Escherichia coli K-12 is presented and reveals ubiquitous as well as narrowly distributed gene families; many families of similar genes within E. coli are also evident.
`` Direct Search'' Solution of Numerical and Statistical Problems
Robert Hooke,T. A. Jeeves +1 more
TL;DR: The phrase "direct search" is used to describe sequential examination of trial solutions involving comparison of each trial solution with the "best" obtained up to that time together with a strategy for determining (as a function of earlier results) what the next trial solution will be.
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Repeated Sequences in DNA
Roy J. Britten,D. E. Kohne +1 more
TL;DR: Hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms and used in medicine, science, and engineering.