A survey on deep learning in medical image analysis
Geert Litjens,Thijs Kooi,Babak Ehteshami Bejnordi,Arnaud Arindra Adiyoso Setio,Francesco Ciompi,Mohsen Ghafoorian,Jeroen van der Laak,Bram van Ginneken,Clara I. Sánchez +8 more
TL;DR: This paper reviews the major deep learning concepts pertinent to medical image analysis and summarizes over 300 contributions to the field, most of which appeared in the last year, to survey the use of deep learning for image classification, object detection, segmentation, registration, and other tasks.
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About: This article is published in Medical Image Analysis. The article was published on 01 Dec 2017. and is currently open access. The article focuses on the topics: Deep learning.
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Citations
Deep convolutional neural networks to predict cardiovascular risk from computed tomography
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Introducing Biomedisa as an open-source online platform for biomedical image segmentation
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References
Deep Residual Learning for Image Recognition
Kaiming He,Xiangyu Zhang,Shaoqing Ren,Jian Sun +3 more
- 27 Jun 2016
TL;DR: In this article, the authors proposed a residual learning framework to ease the training of networks that are substantially deeper than those used previously, which won the 1st place on the ILSVRC 2015 classification task.
•Posted Content
Deep Residual Learning for Image Recognition
TL;DR: This work presents a residual learning framework to ease the training of networks that are substantially deeper than those used previously, and provides comprehensive empirical evidence showing that these residual networks are easier to optimize, and can gain accuracy from considerably increased depth.
117.9K
•Proceedings Article
Very Deep Convolutional Networks for Large-Scale Image Recognition
Karen Simonyan,Andrew Zisserman +1 more
- 04 Sep 2014
TL;DR: This work investigates the effect of the convolutional network depth on its accuracy in the large-scale image recognition setting using an architecture with very small convolution filters, which shows that a significant improvement on the prior-art configurations can be achieved by pushing the depth to 16-19 weight layers.
102.6K
Long short-term memory
TL;DR: A novel, efficient, gradient based method called long short-term memory (LSTM) is introduced, which can learn to bridge minimal time lags in excess of 1000 discrete-time steps by enforcing constant error flow through constant error carousels within special units.
99K
ImageNet classification with deep convolutional neural networks
TL;DR: A large, deep convolutional neural network was trained to classify the 1.2 million high-resolution images in the ImageNet LSVRC-2010 contest into the 1000 different classes and employed a recently developed regularization method called "dropout" that proved to be very effective.
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