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  3. Gene Expression Patterns
  4. 2017
Showing papers in "Gene Expression Patterns in 2017"
Journal Article•10.1016/J.GEP.2017.06.001•
Arabidopsis thaliana sucrose phosphate synthase (sps) genes are expressed differentially in organs and tissues, and their transcription is regulated by osmotic stress

[...]

María Gloria Solís-Guzmán1, Gerardo R. Argüello-Astorga2, José López-Bucio1, León Francisco Ruiz-Herrera1, Joel E. López-Meza1, Lenin Sánchez-Calderón3, Yazmín Carreón-Abud1, Miguel Martínez-Trujillo1 •
Universidad Michoacana de San Nicolás de Hidalgo1, Instituto Potosino de Investigación Científica y Tecnológica2, Autonomous University of Zacatecas3
01 Nov 2017-Gene Expression Patterns
TL;DR: Findings support the idea that sucrose synthesis occurs in the columella cells of the plants that support Suc-6-phosphate synthesis, and suggests that Sucrose has a role in this tissue.

39 citations

Journal Article•10.1016/J.GEP.2017.01.002•
Characterization of arteriovenous identity in the developing neonate mouse retina.

[...]

Angela M. Crist1, Chandler Young1, Stryder M. Meadows1•
Tulane University1
01 Jan 2017-Gene Expression Patterns
TL;DR: Assessment of expression of previously established AV markers and assess arteriovenous acquisition and identity in the murine neonatal retina indicate that, similar to the embryo, acquisition of AV identity occurs in a step-wise process and is largely established by P7 during retina development.

26 citations

Journal Article•10.1016/J.GEP.2017.03.001•
Temporal profiling of photoreceptor lineage gene expression during murine retinal development.

[...]

Tooka Aavani1, Nobuhiko Tachibana2, Valerie A. Wallace3, Jeff Biernaskie4, Carol Schuurmans5, Carol Schuurmans2, Carol Schuurmans1 •
Sunnybrook Research Institute1, Alberta Children's Hospital2, University Health Network3, University of Calgary4, University of Toronto5
01 Jan 2017-Gene Expression Patterns
TL;DR: Four transitory stages during murine retina photoreceptor differentiation are identified marked by the period of onset of expression of newPhotoreceptor lineage genes, which have clarified the dynamic nature of gene expression during the period when Photoreceptor identities are progressively acquired during development.

20 citations

Journal Article•10.1016/J.GEP.2017.03.003•
The expression of sialyltransferases is regulated by the bioavailability and biosynthesis of sialic acids.

[...]

Kaya Bork1, Wenke Weidemann1, Beatrice Berneck1, Magdalena Kuchta1, Dorit Bennmann1, Annett Thate1, Otmar Huber, Vinayaga S. Gnanapragassam1, Rüdiger Horstkorte1 •
Martin Luther University of Halle-Wittenberg1
01 Jan 2017-Gene Expression Patterns
TL;DR: It is suggested that the concentration of the donor substrate of sialyltransferases, which can be regarded as a sensor for the environmental conditions of a cell, regulates not only total sialic acid, but also the quality of sia, which allows a cell to response to altered environmental conditions.

19 citations

Journal Article•10.1016/J.GEP.2017.01.001•
A visual screen for diet-regulated proteins in the Drosophila ovary using GFP protein trap lines.

[...]

Hwei-Jan Hsu1, Daniela Drummond-Barbosa2, Daniela Drummond-Barbosa1•
Vanderbilt University Medical Center1, Johns Hopkins University2
01 Jan 2017-Gene Expression Patterns
TL;DR: 53 GFP-tagged proteins that exhibit changes in levels and/or subcellular localization in the ovary at 12-16 hours after switching females from rich to poor diets are identified, suggesting them as potential candidates for future functional studies.

16 citations

Journal Article•10.1016/J.GEP.2017.06.007•
Differential expression of long noncoding RNAs in congenital microtia.

[...]

Ling Zhang1, Lin Lin1, Yupeng Song1, Bo Pan1, Qinghua Yang1, Haiyue Jiang1 •
Peking Union Medical College1
01 Nov 2017-Gene Expression Patterns
TL;DR: Differential expression of lncRNAs occurs in microtia and related signalling pathways may play an important role in the occurrence and development ofmicrotia.

12 citations

Journal Article•10.1016/J.GEP.2017.08.001•
Spatio-temporal expression patterns of Wnt signaling pathway during the development of temporomandibular condylar cartilage.

[...]

Kan Chen1, Huixin Quan2, Gang Chen2, Di Xiao2•
Lanzhou University1, Dalian Medical University2
01 Nov 2017-Gene Expression Patterns
TL;DR: It is demonstrated that the Wnt signaling pathway was associated with the development of mandibular condylar cartilage at the prenatal and postnatal stages.

12 citations

Journal Article•10.1016/J.GEP.2017.06.006•
Lateralization of housekeeping genes in the brain of one-day old chicks.

[...]

Jacek Lenart1, Klaudia Kogut1, Elzbieta Salinska1•
Polish Academy of Sciences1
01 Nov 2017-Gene Expression Patterns
TL;DR: The results show for the first time that ACTB, commonly used as an avian reference gene, is not suitable for investigation of gene expression in the chick brain and that brain lateralization exact selection of different reference gens for each hemisphere is needed.

11 citations

Journal Article•10.1016/J.GEP.2017.05.002•
Gene expression profiles in mouse cumulus cells derived from in vitro matured oocytes with and without blastocyst formation.

[...]

Yixin Xu1, Tuan-Ping Zhou2, Li Shao2, Bei Zhang2, Kai-Lu Liu2, Chao Gao2, Li Gao2, Jiayin Liu2, Yugui Cui2, Ri-Cheng Chian2, Ri-Cheng Chian1 •
McGill University1, Nanjing Medical University2
01 Nov 2017-Gene Expression Patterns
TL;DR: Based on RNA-sequencing, changes in gene transcription of mouse CCs that were critical for the communication between CCs and oocytes are found and could provide novel insights on non-invasively predicting the oocyte quality and improving developmental competence.

11 citations

Journal Article•10.1016/J.GEP.2017.04.004•
Characterization of Sgo1 expression in developing and adult mouse.

[...]

Andrew T. Song1, Antonella Galli2, Severine Leclerc, Stanley Nattel1, Craig A. Mandato1, Gregor Andelfinger3 •
McGill University1, Wellcome Trust Sanger Institute2, Université de Montréal3
01 Nov 2017-Gene Expression Patterns
TL;DR: This work shows clear SGO1 expression in post-developmental neuronal cells and cytoplasmic localisation in nucleated cells with a transgenic mice model and immunohistochemistry of wild type mice, and demonstrates extranuclear expression of Sgo1 in the developing heart and gut.

10 citations

Journal Article•10.1016/J.GEP.2017.06.010•
Effects of interferon tau on endometrial epithelial cells in caprine in vitro

[...]

Yue Zhang1, Lei Zhang1, Chaofeng Yu1, Xiaoyan Du1, Xiaorui Liu1, Junze Liu1, Xiaopeng An1, Jiangang Wang1, Yuxuan Song1, Guang Li1, Binyun Cao1 •
Northwest A&F University1
01 Nov 2017-Gene Expression Patterns
TL;DR: It is demonstrated that IFNT at 1 ng/ml might induce caprine EEC apoptosis and keep a balance between apoptotic activity and proliferation and regulation of HOXA10, COX-2, PRL, PTEN and STAT3 pathway was likely to be contributed by IFNT to improve the chances for embryo attachment.
Journal Article•10.1016/J.GEP.2017.06.003•
Embryonic expression patterns of Eukaryotic EndoU ribonuclease family gene endouC in zebrafish.

[...]

Hung-Chieh Lee1, Chuan-Yang Fu1, Chih-Wei Zeng2, Huai-Jen Tsai1•
Mackay Medical College1, National Taiwan University2
01 Nov 2017-Gene Expression Patterns
TL;DR: While the endouC transcript was only weakly present at early developmental stages, its expression was greatly increased in embryos from 18 to 48 h post-fertilization (hpf) and then decreased after 72 hpf, suggesting that it is a maternal gene.
Journal Article•10.1016/J.GEP.2017.04.003•
Dorsal fin development in flounder, Paralichthys olivaceus: Bud formation and its cellular origin.

[...]

Jie Chen1, Xiaoyu Liu1, Xiaohua Yao1, Fei Gao1, Baolong Bao1 •
Shanghai Ocean University1
01 Nov 2017-Gene Expression Patterns
TL;DR: Molecular markers of cell type showed the existence of neural crest cells, scleroblasts and sclerotomes in the dorsal fin bud, further indicating that common basic molecular mechanisms might be utilized by median fins.
Journal Article•10.1016/J.GEP.2017.07.001•
Gene expression profiles of fin regeneration in loach (Paramisgurnus dabryanu).

[...]

Li Li1, Li Li2, Jingya He1, Linlin Wang1, Weihua Chen3, Zhongjie Chang1 •
Henan Normal University1, University of Ottawa2, Swiss Institute of Bioinformatics3
01 Nov 2017-Gene Expression Patterns
TL;DR: This study demonstrated how to investigate the transcript profiles with an emphasis on bioinformatics intervention and how to identify potential genes related to fin regeneration processes, and provides a foundation or knowledge for further research into genes and molecular mechanisms of fin regeneration.
Journal Article•10.1016/J.GEP.2017.08.003•
Modulation of gene expression by nutritional state and hormones in Bombyx larvae in relation to its growth period.

[...]

Bembem Thounaojam1, Bela Keshan1•
North Eastern Hill University1
01 Nov 2017-Gene Expression Patterns
TL;DR: It is demonstrated that Bombyx larvae at the terminal growth period (TGP, after critical weight) had a significantly greater increase in the expression level of Akt in the fat body than at the active growing period (AGP, before critical weight).
Journal Article•10.1016/J.GEP.2017.06.004•
Conservation of BMP2/4 expression patterns within the clade Branchiostoma (amphioxus): Resolving interspecific discrepancies.

[...]

Luok Wen Yong1, Stéphanie Bertrand2, Jr-Kai Yu1, Hector Escriva2, Nicholas D. Holland3 •
Academia Sinica1, University of Paris2, University of California, San Diego3
01 Nov 2017-Gene Expression Patterns
TL;DR: Larval expression of BMP2/4 closely resembles the pattern previously reported for B. floridae but transcription is undetectable in tissues juxtaposed to the forming mouth, but is seen in several other anterior structures (most conspicuously in the lining of the rostral coelom and the club-shaped gland).
Journal Article•10.1016/J.GEP.2017.06.011•
Differential expression pattern of key regulatory developmental genes in pre-implant zona free cloned vs in vitro fertilized goat embryos.

[...]

Dharmendra Kumar, B. C. Sarkhel
01 Nov 2017-Gene Expression Patterns
TL;DR: The dissimilar pattern of gene expression of SCNT might be a consequence of incomplete reprogramming of donor nucleus which resulted into lower blastocyst rate ofSCNT as compared to IVF embryos.
Journal Article•10.1016/J.GEP.2017.03.004•
High resolution methylation analysis of the HoxA5 regulatory region in different somatic tissues of laboratory mouse during development.

[...]

Puja Sinha1, Kiran Singh2, Manisha Sachan1•
Motilal Nehru National Institute of Technology Allahabad1, Banaras Hindu University2
01 Jan 2017-Gene Expression Patterns
TL;DR: Methylation profiling of HoxA5 gene promoter shows higher methylation in adult as compared to fetus in various somatic tissues of mouse being highest in adult spleen, however q-PCR results show higher expression during fetal stagesbeing highest in fetal intestine followed by brain, liver and spleen and clearly indicate a strict correlation between DNA methylation and tissue-specific gene expression.
Journal Article•10.1016/J.GEP.2017.03.002•
Expression patterns of prune2 is regulated by Notch and retinoic acid signaling pathways in the zebrafish embryogenesis.

[...]

Mrudhula Anuppalle1, Sateesh Maddirevula, Ajeet Kumar1, Tae-Lin Huh2, Joonho Choe3, Myungchull Rhee1 •
Chungnam National University1, UPRRP College of Natural Sciences2, KAIST3
01 Jan 2017-Gene Expression Patterns
TL;DR: The expression profiles and transcriptional regulation of prune2 in zebrafish embryos are defined and it is proposed that Prune2 might be a putative regulator for CNS development in zbrafish embryogenesis.
Journal Article•10.1016/J.GEP.2017.06.009•
Different expression of sox17 gene during gametogenesis between scallop Chlamys farreri and vertebrates.

[...]

Shaoshuai Liang1, Zhifeng Zhang1, Dandan Yang1, Yingying Chen1, Zhenkui Qin1 •
Chinese Ministry of Education1
01 Nov 2017-Gene Expression Patterns
TL;DR: This study cloned a full-length cDNA sequence of sox17 from Zhikong scallop Chlamys farreri, and determined its expression characteristics in gonad at mRNA and protein levels, which implied that Cf-sox17 may involve in gametogenesis of bivalves and the function may differ from that in vertebrates.
Journal Article•10.1016/J.GEP.2017.04.002•
sept8a and sept8b mRNA expression in the developing and adult zebrafish

[...]

Constantin Berger1, Frederik Helmprobst1, Prisca Chapouton, Christina Lillesaar1, Christian Stigloher1 •
University of Würzburg1
01 Nov 2017-Gene Expression Patterns
TL;DR: This study provides a first detailed insight into the expression of sept8a and sePT8b in zebrafish and contributes to a more comprehensive understanding of septin biology in vertebrate model systems.
Journal Article•10.1016/J.GEP.2017.06.008•
Molecular cloning and mRNA expression pattern of Sox4 in Paramisgurnus dabryanus

[...]

Xiaohua Xia1, Ruyan Wan1, Weiran Huo1, Linxia Zhang1, Xiaopei Xia1, Zhongjie Chang1 •
Henan Normal University1
01 Nov 2017-Gene Expression Patterns
TL;DR: The preliminary findings suggested that PdSox4 is highly conserved during vertebrate evolution and involved in a wide range of developmental processes including embryogenesis, neurogenesis and gonad development.
Journal Article•10.1016/J.GEP.2017.06.005•
Expression analyses of salinity stress- associated ESTs in Aeluropus littoralis.

[...]

Tayebeh Kakeshpour1, Sajad Rashidi Monfared1, Amin Ebrahimi2, Arman Beyraghdar Kashkooli1, Arman Beyraghdar Kashkooli3, Esmaeil Ebrahimie4, Esmaeil Ebrahimie5 •
Tarbiat Modares University1, University of Shahrood2, Wageningen University and Research Centre3, University of Adelaide4, Shiraz University5
01 Nov 2017-Gene Expression Patterns
TL;DR: In this paper, the full-length cDNA of vacuolar H + -pyrophosphatase (VP) was isolated utilizing 3′ and 5′ rapid amplification of cDNA ends polymerase chain reaction (RACE-PCR) and characterized.
Journal Article•10.1016/J.GEP.2017.05.001•
Embryonic expression of festina lente (fel), a novel maternal gene, in the oligochaete annelid Tubifex tubifex.

[...]

Takuma Nakamura1, Inori Shiomi1, Takashi Shimizu1•
Hokkaido University1
01 Nov 2017-Gene Expression Patterns
TL;DR: Cloned and characterized the expression of a novel maternal gene festina lente (designated Ttu-fel) from the clitellate annelid Tubifex tubifex and found that its expression is restricted to oocytes undergoing maturation division and early embryos up to 22-cell stage.
Journal Article•10.1016/J.GEP.2017.03.005•
Regional localization of activin-βA, activin-βC, follistatin, proliferation, and apoptosis in adult and developing mouse prostate ducts.

[...]

Elspeth Gold1, Sylvia Zellhuber-McMillan1, Gail P. Risbridger2, Francesco E. Marino1•
University of Otago1, Monash University, Clayton campus2
01 Jan 2017-Gene Expression Patterns
TL;DR: Evidence is provided to support a role of activin-C in prostate development and new insights are provided in the spatiotemporal localization of activins and their antagonists during mouse prostate development.
Journal Article•10.1016/J.GEP.2017.08.004•
Comparative expression profiling of AtRAD5B and AtNDL1: Hints towards a role in G protein mediated signaling.

[...]

Nisha Khatri1, Swati Singh1, Nasmeen Hakim1, Yashwanti Mudgil1•
University of Delhi1
01 Nov 2017-Gene Expression Patterns
TL;DR: This study predicts the existence of a signaling network involving AtNDL1, AGB1 with AtRAD5B, which is known to recruit SWI/SNF remodeling complexes to the chromatin and regulate expression of genes involved in flower and leaf formation.
Journal Article•10.1016/J.GEP.2016.12.002•
Temporal and spatial expression pattern of Nnat during mouse eye development.

[...]

Saadettin Sel1, Eva Patzel1, Lucia Poggi1, Delia Kaiser1, Thomas Kalinski2, Martin Schicht, Friedrich Paulsen, Norbert Nass2 •
Heidelberg University1, Otto-von-Guericke University Magdeburg2
01 Jan 2017-Gene Expression Patterns
TL;DR: The expression pattern of Nnat suggests that Nnat may play an important role during eye development and in the maintenance of mature eye.
Journal Article•10.1016/J.GEP.2017.11.005•
Comparative expression analyses of bone morphogenetic protein 4 (BMP4) expressions in muscles of tilapia and common carp indicate that BMP4 plays a role in the intermuscular bone distribution in a dose-dependent manner

[...]

Shengyan Su1, Zaijie Dong2, Zaijie Dong1•
Chinese Academy of Fishery Sciences1, Nanjing Agricultural University2
26 Nov 2017-Gene Expression Patterns
TL;DR: The results of this study suggest that BMP4 is likely to play a key role in the determination of intermuscular bone distribution in fish in a dose-dependent manner.
Journal Article•10.1016/J.GEP.2017.06.002•
Deciphering the role of microRNA - A step by step guide.

[...]

Siddharth Manvati1, Kailash Chandra Mangalhara1, Juveria Khan1, Geeta Lal Pathania1, Srishti Kaul2, M.K. Kaushik1, Ankita Arora1, Pawan K. Dhar1 •
Jawaharlal Nehru University1, Northeastern University2
01 Nov 2017-Gene Expression Patterns
TL;DR: This perspective as a guide would help in identifying novel targets for a microRNA, as shown for miR-145a-5p, which down-regulated the mRNA expression of ADD3 and BRCA2, using bioinformatic tools and experimental assays.
Journal Article•10.1016/J.GEP.2017.08.002•
Expression and characterization of the zebrafish orthologue of the human FOLR1 gene during embryogenesis.

[...]

RoJenia N. Jones1, Stephanie A. Erhard1, Mark R. Malham1, Ayaz Y. Gen1, Kyle Sullivan1, Kenneth W. Olsen1, Rodney M. Dale1 •
Loyola University Chicago1
01 Nov 2017-Gene Expression Patterns
TL;DR: It is demonstrated that zgc:165502 is the zebrafish orthologue of the human FOLR1 gene, which is usually up-regulated in rapidly dividing cells, including many types of cancerous tumors.

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