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  4. 1994
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  3. Biophysical Journal
  4. 1994
Showing papers in "Biophysical Journal in 1994"
Journal Article•10.1016/S0006-3495(94)80775-1•
MR diffusion tensor spectroscopy and imaging.

[...]

Peter J. Basser1, J. Mattiello1, D. Lebihan1•
National Center for Research Resources1
01 Jan 1994-Biophysical Journal
TL;DR: Once Deff is estimated from a series of NMR pulsed-gradient, spin-echo experiments, a tissue's three orthotropic axes can be determined and the effective diffusivities along these orthotropic directions are the eigenvalues of Deff.

6,269 citations

Journal Article•
Boundary-conditions for the diffusion equation in radiative-transfer

[...]

Rc Haskell, Bj Tromberg, Lo Svaasand, Tt Tsay, Tc Feng, Mcadams 
01 Feb 1994-Biophysical Journal
TL;DR: In this article, Haskell et al. proposed a boundary condition for the diffusion equation in radiative transfer, which is based on the partial-current and extrapolated boundary conditions, which are commonly applied to the surface of a semi-infinite turbid medium.

1,075 citations

Journal Article•10.1016/S0006-3495(94)80887-2•
Mutations in the K+ channel signature sequence

[...]

Lise Heginbotham1, Zhe Lu1, Tatiana Abramson1, Roderick MacKinnon1•
Harvard University1
01 Apr 1994-Biophysical Journal
TL;DR: The results illustrate that the hydroxyl groups at the third and fourth positions, and the aromatic group at position seven, are not essential in determining K+ selectivity.

874 citations

Journal Article•10.1016/S0006-3495(94)81014-8•
Control of cytoskeletal mechanics by extracellular matrix, cell shape, and mechanical tension

[...]

Ning Wang1, Donald E. Ingber1•
Harvard University1
01 Jun 1994-Biophysical Journal
TL;DR: The results suggest that the effects of ECM on CSK mechanics are not due to changes in osmotic or hydrostatic pressures, rather, ECM alters CSKstiffness and apparent viscosity by binding integrins, promoting formation of molecular links with the CSK, transmitting mechanical stresses across these linkages, and inducing structural rearrangements within a continuous, tensionally integrated CSK lattice.

577 citations

Journal Article•10.1016/S0006-3495(94)80799-4•
The use of fluorescence methods to monitor unfolding transitions in proteins

[...]

Maurice R. Eftink1•
University of Mississippi1
01 Feb 1994-Biophysical Journal
TL;DR: Simulations are presented to show that certain fluorescence observables directly track the population of states in an unfolding transition, whereas other observables skew the transition toward the dominant fluorescing species.

507 citations

Journal Article•10.1016/S0006-3495(94)80500-4•
Effects of rapid buffers on Ca2+ diffusion and Ca2+ oscillations.

[...]

John Wagner1, Joel Keizer1•
University of California, Davis1
01 Jul 1994-Biophysical Journal
TL;DR: A simplified version of the model of the activation and inhibition of the IP3 receptor Ca2+ channel in the ER membrane is used to illustrate the way in whichCa2+ buffering can affect both the amplitude and existence of Ca2- oscillations.

496 citations

Journal Article•10.1016/S0006-3495(94)80729-5•
X-ray diffraction evidence for the extensibility of actin and myosin filaments during muscle contraction

[...]

K. Wakabayashi1, Yasunobu Sugimoto1, Hiromasa Tanaka1, Yutaka Ueno1, Yasunori Takezawa1, Y. Amemiya1 •
Osaka University1
01 Dec 1994-Biophysical Journal
TL;DR: The results indicate that a large part of the sarcomere compliance of an active muscle is caused by the extensibility of the actin and myosin filaments; 42% of the compliance resides in the act in filaments, and 27% of it is in the myosIn filaments.

482 citations

Journal Article•10.1016/S0006-3495(94)80591-0•
Amyloid-beta aggregation: selective inhibition of aggregation in mixtures of amyloid with different chain lengths.

[...]

Seth W. Snyder, U.S. Ladror, W.S. Wade, Gary T. Wang, L.W. Barrett, E.D. Matayoshi, H.J. Huffaker, Grant A. Krafft, Thomas F. Holzman 
01 Sep 1994-Biophysical Journal
TL;DR: The relative abundance and rates of production of different-length A beta and its exposure to radical damage may be factors in the accumulation of A beta in plaques in vivo.

412 citations

Journal Article•10.1016/S0006-3495(94)80453-9•
Theory of electroporation of planar bilayer membranes: predictions of the aqueous area, change in capacitance, and pore-pore separation

[...]

S.A. Freeman1, M.A. Wang1, James C. Weaver1•
Massachusetts Institute of Technology1
01 Jul 1994-Biophysical Journal
TL;DR: A transient aqueous pore theory is used to estimate the fraction of the membrane area, Fw(t), which is temporarily occupied by water-filled pores for short square, exponential, and bipolar square pulses, and it is found that a quantitative description of electroporation requires that a pore size distribution, rather than a single size pore.

383 citations

Journal Article•10.1016/S0006-3495(94)80677-0•
Spatial non-uniformities in [Ca2+]i during excitation-contraction coupling in cardiac myocytes

[...]

Mark B. Cannell1, H. Cheng1, W. J. Lederer1•
St George's Hospital1
01 Nov 1994-Biophysical Journal
TL;DR: The results are discussed with respect to a stochastic local control model for excitation-contraction (E-C) coupling, and it is proposed that the fundamental unit of E-C coupling consists of one dihydropyridine receptor activating a small group of ryanodine receptors (possibly four) in a square packing model.

366 citations

Journal Article•10.1016/S0006-3495(94)81011-2•
Mapping interaction forces with the atomic force microscope

[...]

Manfred Radmacher1, Jason Cleveland1, Monika Fritz1, Helen G. Hansma1, Paul K. Hansma1 •
University of California, Santa Barbara1
01 Jun 1994-Biophysical Journal
TL;DR: Force curves were recorded as the sample was raster-scanned under the tip, opening new opportunities for imaging with the atomic force microscope: several characteristics of the samples can be measured simultaneously, for example, topography, adhesion forces, elasticity, van der Waals, and electrostatic interactions.
Journal Article•10.1016/S0006-3495(94)80938-5•
Modulation of interaction forces between bilayers exposing short-chained ethylene oxide headgroups.

[...]

Tonya L. Kuhl1, Deborah E. Leckband1, D.D. Lasic1, Jacob N. Israelachvili1•
University of California, Santa Barbara1
01 May 1994-Biophysical Journal
TL;DR: A systematic study using the Surface Forces Apparatus to measure directly the interactions between two phosphatidyl ethanolamine lipid bilayers, finding that the force becomes repulsive at all separations and that the thickness of the steric barrier could be controlled easily by adjusting the concentration of the modified lipids.
Journal Article•10.1016/S0006-3495(94)80882-3•
Gating of Shaker K+ channels: II. The components of gating currents and a model of channel activation

[...]

Francisco Bezanilla1, Eduardo Perozo1, Enrico Stefani1•
University of California, Los Angeles1
01 Apr 1994-Biophysical Journal
TL;DR: Steady-state and kinetic properties of gating currents of the Shaker K+ channels were studied in channels expressed in Xenopus oocytes and recorded with the cut-open oocyte voltage clamp and a sequential model is able to reproduce all the kinetic and steady-state properties and predicts many of the properties of the ionic currents.
Journal Article•10.1016/S0006-3495(94)80723-4•
Components of the carbonyl stretching band in the infrared spectra of hydrated 1,2-diacylglycerolipid bilayers: a reevaluation.

[...]

Ruthven N.A.H. Lewis1, Ronald N. McElhaney1, W. Pohle1, H. H. Mantsch1•
University of Alberta1
01 Dec 1994-Biophysical Journal
TL;DR: In hydrated 1,2-diacyl PC bilayers, the patterns of infrared absorption exhibited by ester carbonyl groups located at the primary and secondary positions of the glycerol backbone are similar and suggest that the acyl-alkyl PCs are suitable models of their diacyl analogue.
Journal Article•10.1016/S0006-3495(94)81017-3•
Local measurements of viscoelastic moduli of entangled actin networks using an oscillating magnetic bead micro-rheometer.

[...]

Florian Ziemann1, Joachim O. Rädler1, Erich Sackmann1•
Technische Universität München1
01 Jun 1994-Biophysical Journal
TL;DR: A magnetically driven bead micro-rheometer for local quantitative measurements of the viscoelastic moduli in soft macromolecular networks such as an entangled F-actin solution is described, demonstrating that the magnetic bead micro
Journal Article•10.1016/S0006-3495(94)80471-0•
Dual-wavelength ratiometric fluorescence measurement of the membrane dipole potential

[...]

Eitan Gross1, Richard Bedlack1, Leslie M. Loew1•
University of Connecticut Health Center1
01 Jul 1994-Biophysical Journal
TL;DR: This work shows that the potential-sensitive fluorescent dye 1-(3-sulfonatopropyl)-4-[beta[2-(di-n-octylamino)-6- naphthyl]vinyl]pyridinium betaine (di-8-ANEPPS) can be used to measure changes in the intramembrane dipole potential and suggests that the gradient in Dipole potential occurs over a span s5 A, a short distance
Journal Article•10.1016/S0006-3495(94)80740-4•
Contribution of the mitochondrial compartment to the optical properties of the rat liver: a theoretical and practical approach

[...]

Bertrand Beauvoit1, Toshiyuki Kitai1, Britton Chance1•
University of Pennsylvania1
01 Dec 1994-Biophysical Journal
TL;DR: The purpose of this work was to analyze the contribution of the mitochondria to the optical properties, i.e., light absorption and scattering, of the blood-free rat liver and found that the mitochondrial compartment is the primary factor for the light scattering in the rat liver.
Journal Article•10.1016/S0006-3495(94)80649-6•
Viscoelasticity of living cells allows high resolution imaging by tapping mode atomic force microscopy.

[...]

Constant A.J. Putman1, van der Kees O. Werf1, de Bart G. Grooth1, van Niek F. Hulst1, Jan Greve1 •
University of Twente1
01 Oct 1994-Biophysical Journal
TL;DR: A new mode of operation is described in which the standard V-shaped silicon nitride cantilever is oscillated under liquid and damped by the interaction between AFM tip and sample surface, making it possible to study physiological processes, such as cell growth, with a minimal level of perturbation and high spatial resolution.
Journal Article•10.1016/S0006-3495(94)80538-7•
Passive and active tension in single cardiac myofibrils.

[...]

Wolfgang A. Linke1, V.I. Popov1, Gerald H. Pollack1•
University of Washington1
01 Aug 1994-Biophysical Journal
TL;DR: Knowing the myofibrillar component of passive tension allowed us to infer the stress-strain relation of titin, the polypeptide thought to support passive force in the sarcomere, which is similar to that reported for elastin.
Journal Article•10.1016/S0006-3495(94)80733-7•
Motion and enzymatic degradation of DNA in the atomic force microscope.

[...]

Magdalena Bezanilla1, Barney Drake1, Evgeny Nudler1, Mikhail Kashlev1, Paul K. Hansma1, Helen G. Hansma1 •
University of California, Santa Barbara1
01 Dec 1994-Biophysical Journal
TL;DR: The dynamics and enzymatic degradation of single DNA molecules can now be observed with the atomic force microscope with a combination of two advances: Tapping in fluid has reduced lateral forces, which permits the imaging of loosely adsorbed molecules; and the presence of nickel ions appears to form a relatively stable bridge between the positively charged mica and the negatively charged DNA phosphate backbone.
Journal Article•10.1016/S0006-3495(94)80455-2•
Correlation approach to identify coding regions in DNA sequences.

[...]

S.M. Ossadnik1, Sergey V. Buldyrev1, Ary L. Goldberger1, Shlomo Havlin1, Rosario N. Mantegna1, Chung-Kang Peng1, Michael Simons1, H. E. Stanley1 •
Boston University1
01 Jul 1994-Biophysical Journal
TL;DR: An algorithm is developed that enables investigators to perform a statistical analysis on long DNA sequences to locate possible coding regions and supports the claim that there is a fundamental difference in the correlation property between coding and noncoding sequences.
Journal Article•10.1016/S0006-3495(94)80990-7•
The intrinsic pka values for phosphatidylcholine, phosphatidylethanolamine, and phosphatidylserine in monolayers deposited on mercury electrodes

[...]

Maria Rosa Moncelli1, Lucia Becucci1, Rolando Guidelli1•
University of Florence1
01 Jun 1994-Biophysical Journal
TL;DR: The intrinsic pKa values of the phosphate groups of phosphatidylcholine and PC andosphatidylethanolamine in self-organized monolayers deposited on a hanging mercury drop electrode were determined by a novel procedure based on measurements of the differential capacity C of this lipid-coated electrode.
Journal Article•10.1016/S0006-3495(94)80889-6•
A comparison of DMPC- and DLPE-based lipid bilayers

[...]

Krishnan Damodaran1, Kenneth M. Merz1•
Pennsylvania State University1
01 Apr 1994-Biophysical Journal
TL;DR: It is proposed that the DLPE bilayer interface can correlate itself with another DLPE interface by alignment of the regions of positive (or negative) charge on one leaflet with the opposite charges on the opposing leaflet, which results in a surface that has regions ofpositive and negative charge that reside in the same plane along the bilayer normal.
Journal Article•10.1016/S0006-3495(94)80472-2•
Lipid mono- and bilayer supported on polymer films: composite polymer-lipid films on solid substrates

[...]

M. Kühner1, Robert Tampé1, Erich Sackmann1•
Technische Universität München1
01 Jul 1994-Biophysical Journal
TL;DR: Lateral diffusion and fluorescent probe permeation measurements yield insight into the continuity of the lipid layers and show that monolayers exposed to air are much less sensitive towards polymer heterogeneities than bilayers below water, which is explained in terms of the wetting laws.
Journal Article•10.1016/S0006-3495(94)80712-X•
Potentiation of large conductance KCa channels by niflumic, flufenamic, and mefenamic acids

[...]

Michela Ottolia1, L. Toro1•
Baylor College of Medicine1
01 Dec 1994-Biophysical Journal
TL;DR: Results indicate that KCa channels possess at least one fenamatereceptor whose occupancy leads to channel opening, and niflumic acid applied from the external side did not interfere with channel block by charybdotoxin, suggesting that its site of action is not at or near the charyBDotoxin receptor.
Journal Article•10.1016/S0006-3495(94)80846-X•
Virtual electrode effects in myocardial fibers

[...]

Stephen B. Knisley1, Bruce C. Hill1, Raymond E. Ideker1•
Duke University1
01 Mar 1994-Biophysical Journal
TL;DR: Virtual electrode effects of unipolar stimulation occur in myocardial fibers, and for sufficiently strong stimuli the virtual electrode effects may influence electrical behavior of the myocardium.
Journal Article•10.1016/S0006-3495(94)80835-5•
A global model of the protein-solvent interface

[...]

Valère Lounnas1, Bernard Pettitt1, G. N. Phillips1•
University of Houston1
01 Mar 1994-Biophysical Journal
TL;DR: A simple model is proposed where the solvent distribution measured perpendicularly to the protein surface is utilized to reconstruct the simulated network of hydration within 6 A from theprotein surface with a relative error of only 17%.
Journal Article•10.1016/S0006-3495(94)80473-4•
Phosphorylation reverses the membrane association of peptides that correspond to the basic domains of MARCKS and neuromodulin

[...]

Jiyun Kim1, P. J. Blackshear1, J. D. Johnson1, Stuart McLaughlin1•
Stony Brook University1
01 Jul 1994-Biophysical Journal
TL;DR: In this article, it was shown that significant membrane binding of MARCKS requires both hydrophobic insertion of the N-terminal myristate into the bilayer and electrostatic association of the single cluster of basic residues in the protein with acidic lipids.
Journal Article•10.1016/S0006-3495(94)80834-3•
Reduction-of-dimensionality kinetics at reaction-limited cell surface receptors.

[...]

Daniel Axelrod1, M.D. Wang1•
University of Michigan1
01 Mar 1994-Biophysical Journal
TL;DR: This article presents a simple theory of RD rate enhancement for reaction-limited receptors that are either reversible or irreversible binders that is applicable to actual ligand/receptor systems with binding success probabilities at the opposite extreme from the perfect sink/diffusion-limited models.
Journal Article•10.1016/S0006-3495(94)80753-2•
Low single channel conductance of the major skeletal muscle chloride channel, ClC-1.

[...]

Michael Pusch1, Klaus Steinmeyer1, Thomas J. Jentsch1•
University of Hamburg1
01 Jan 1994-Biophysical Journal
TL;DR: Nonstationary noise analysis revealed that both rat and human ClC-1 have a low single channel conductance, which may explain the lack of single-channel data for chloride channels from skeletal muscle despite its high macroscopic chloride conductance.
...

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