Yaping Chen
Beijing Institute of Genomics
5 Papers
116 Citations
Yaping Chen is an academic researcher from Beijing Institute of Genomics. The author has contributed to research in topics: Shotgun sequencing & Genome. The author has an hindex of 5, co-authored 5 publications. Previous affiliations of Yaping Chen include Chinese Academy of Sciences.
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Papers
Complete Genome Sequence of the Metabolically Versatile Halophilic Archaeon Haloferax mediterranei, a Poly(3-Hydroxybutyrate-co-3-Hydroxyvalerate) Producer
Jing Han,Fan Zhang,Jing Hou,Xiaoqing Liu,Ming Li,Hailong Liu,Lei Cai,Bing Zhang,Yaping Chen,Jian Zhou,Songnian Hu,Hua Xiang +11 more
TL;DR: The complete genome of H. mediterranei CGMCC 1.2087 is reported, consisting of one chromosome and three megaplasmids.
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Complete Genome Analysis of Sulfobacillus acidophilus Strain TPY, Isolated from a Hydrothermal Vent in the Pacific Ocean
TL;DR: The genome sequence and annotation of the strain TPY, which is the first complete genome of Sulfobacillus acidophilus, are reported, which confirmsFerrous iron and sulfur oxidation in acidic environments in strain TPy have been confirmed.
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Transcriptome and Expression Profiling Analysis of the Hemocytes Reveals a Large Number of Immune-Related Genes in Mud Crab Scylla paramamosain during Vibrio parahaemolyticus Infection
Chuping Xie,Yaping Chen,Wanwei Sun,Jun Ding,Lizhen Zhou,Shasha Wang,Shuqi Wang,Yueling Zhang,Dashi Zhu,Xiaobo Wen,Songnian Hu,Shengkang Li +11 more
TL;DR: Analysis of the expression profile of crabs under infection provides invaluable new data for biological research in S. paramamosain, such as the identification of novel genes in the hemocytes during V. parahaemolyticus infection, which will facilitate comprehensive understanding of the mechanisms involved in the immune response to bacterial infection and will be helpful for diseases prevention in crab aquaculture.
Complete Genome and Transcriptomes of Streptococcus parasanguinis FW213: Phylogenic Relations and Potential Virulence Mechanisms
Jianing Geng,Cheng-Hsun Chiu,Cheng-Hsun Chiu,Petrus Tang,Yaping Chen,Yaping Chen,Hui-Ru Shieh,Songnian Hu,Yi-Ywan M. Chen +8 more
TL;DR: The complete genome of strain FW213 was determined using the traditional shotgun sequencing approach and further refined by the transcriptomes of cells in early exponential and early stationary growth phases, suggesting that FW213 possess a range of mechanisms to avoid host immune clearance, to colonize host tissues, to survive within oral biofilms and to overcome various environmental insults.
Complete Genome Sequence of Alicyclobacillus acidocaldarius Strain Tc-4-1
TL;DR: The whole genome sequence of the Aliciayclobacillus acidocaldarius strain Tc-4-1 is reported, which can produce heat- and acid-stable enzymes, such as amylase and esterase, which may be important in industry.
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