William Stedman
8 Papers
21 Citations
William Stedman is an academic researcher. The author has contributed to research in topics: Genome & Genomics. The author has an hindex of 6, co-authored 8 publications.
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Papers
Extensive sequencing of seven human genomes to characterize benchmark reference materials
Justin M. Zook,David Catoe,Jennifer McDaniel,Lindsay K. Vang,Noah Spies,Noah Spies,Arend Sidow,Ziming Weng,Yuling Liu,Christopher E. Mason,Noah Alexander,Elizabeth Henaff,Alexa B. R. McIntyre,Dhruva Chandramohan,Feng Chen,Erich Jaeger,Ali Moshrefi,Khoa Pham,William Stedman,Tiffany Y. Liang,Michael Saghbini,Zeljko Dzakula,Alex Hastie,Han Cao,Gintaras Deikus,Eric E. Schadt,Robert Sebra,Ali Bashir,R Truty,Christopher C. Chang,Natali Gulbahce,Keyan Zhao,Srinka Ghosh,Fiona Hyland,Yutao Fu,Mark Chaisson,Chunlin Xiao,Jonathan Trow,Stephen T. Sherry,Alexander Wait Zaranek,Madeleine Ball,Jason Bobe,Preston W. Estep,George M. Church,Patrick Marks,Sofia Kyriazopoulou-Panagiotopoulou,Grace X.Y. Zheng,Michael Schnall-Levin,Heather Ordonez,Patrice A Mudivarti,Kristina Giorda,Ying Sheng,Karoline Bjarnesdatter Rypdal,Marc L. Salit,Marc L. Salit +54 more
TL;DR: A large, diverse set of sequencing data for seven human genomes is described; five are current or candidate NIST Reference Materials and two Personal Genome Project trios, one of Ashkenazim Jewish ancestry and one of Chinese ancestry are described.
Extensive sequencing of seven human genomes to characterize benchmark reference materials
Justin M. Zook,David Catoe,Jennifer McDaniel,Lindsay K. Vang,Noah Spies,Arend Sidow,Ziming Weng,Yuling Liu,Christopher E. Mason,Noah Alexander,Dhruva Chandramohan,Elizabeth Henaff,Feng Chen,Erich Jaeger,Ali Moshrefi,Khoa Pham,William Stedman,Tiffany Y. Liang,Michael Saghbini,Zeljko Dzakula,Alex Hastie,Han Cao,Gintaras Deikus,Eric E. Schadt,Robert Sebra,Ali Bashir,R Truty,Christopher C. Chang,Natali Gulbahce,Keyan Zhao,Srinka Ghosh,Fiona Hyland,Yutao Fu,Mark Chaisson,Jonathan Trow,Chunlin Xiao,Stephen T. Sherry,Alexander Wait Zaranek,Madeleine Ball,Jason Bobe,Preston W. Estep,George M. Church,Patrick Marks,Sofia Kyriazopoulou-Panagiotopoulou,Grace X.Y. Zheng,Michael Schnall-Levin,Heather Ordonez,Patrice A Mudivarti,Kristina Giorda,Marc L. Salit +49 more
TL;DR: A large, diverse set of sequencing data for seven human genomes is described; five are current or candidate NIST Reference Materials and two Personal Genome Project trios, one of Ashkenazim Jewish ancestry and one of Chinese ancestry are described.
Genome-Wide Structural Variation Detection by Genome Mapping on Nanochannel Arrays.
Angel C.Y. Mak,Yvonne Y. Y. Lai,Ernest T. Lam,Tsz-Piu Kwok,Alden King-Yung Leung,Annie Poon,Yulia Mostovoy,Alex Hastie,William Stedman,Thomas Anantharaman,Warren Andrews,Xiang Zhou,Andy Wing Chun Pang,Heng Dai,Catherine Chu,Chin Lin,Jacob J. K. Wu,Catherine M. L. Li,Jing-Woei Li,Aldrin Kay-Yuen Yim,Saki Chan,Justin Sibert,Željko Džakula,Han Cao,Siu-Ming Yiu,Ting-Fung Chan,Kevin Y. Yip,Ming Xiao,Pui-Yan Kwok +28 more
TL;DR: It is shown that genome mapping with long, fluorescently labeled DNA molecules imaged on nanochannel arrays can be used for whole-genome structural variation detection without sequencing, and finds that individuals have many more structural variants than those published, including some with the potential of disrupting gene function or regulation.
Optical Nano-mapping and Analysis of Plant Genomes.
Ming-Cheng Luo,Karin R. Deal,Armond Murray,Tingting Zhu,Alex Hastie,William Stedman,Henry B. Sadowski,Michael Saghbini +7 more
TL;DR: The detailed protocol is described here the detailed protocol that was used to generate a whole genome BioNano map for Aegilops tauschii, the D genome progenitor of hexaploid wheat (Triticum aestivum) to validate sequence assembly based on the next-generation sequencing, order sequence scaffolds, and ultimately build pseudomolecules for the genome.
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Patent
Systems and methods for assessing biomolecule characteristics
Parikshit A. Deshpande,Arthur G. Marlin,Michael Kochersperger,Alexey Y. Sharonov,William Stedman,Ming Xiao,Henry B. Sadowski,Somes K. Das,Matthew C. Akana,Daniel Bozinov,Michael Requa,Han Cao +11 more
- 20 Oct 2011
TL;DR: In this paper, the authors present methods and systems for assessing the presence and extent of damage on a polynucleotide by incorporating a label at the site of the damage and imaging the label to determine the presence of and the extent of such damage.
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