Thomas P. Larsson
Uppsala University
5 Papers
64 Citations
Thomas P. Larsson is an academic researcher from Uppsala University. The author has contributed to research in topics: Genome & RefSeq. The author has an hindex of 5, co-authored 5 publications.
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Papers
The G protein-coupled receptor subset of the chicken genome.
Malin C. Lagerström,Anders R. Hellström,David E. Gloriam,Thomas P. Larsson,Helgi B. Schiöth,Robert Fredriksson +5 more
TL;DR: This dataset of chicken GPCRs is the largest curated dataset from a single gene family from a non-mammalian vertebrate, and has high proportions of orthologous pairs, although the percentage of amino acid identity varies.
Comparison of the current RefSeq, Ensembl and EST databases for counting genes and gene discovery
TL;DR: The results indicate that there are about 25 000 unique genes in the union of RefSeq and Ensembl with 12–18% and 8–13% of the genes in each set unique to the other set, respectively.
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Expression and functional analysis of fibulin-1 (Fbln1) during normal and abnormal placental development of the mouse
Umashankar Singh,Tong Sun,Thomas P. Larsson,Rosemary W. Elliott,Gunther Kostka,Reinald Fundele +5 more
TL;DR: It is shown that a murine placental overgrowth phenotype is associated with elevated Fbln1 transcript levels, suggesting that the gene and its product have a functional role in placentation.
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Evaluation of EST-data using the genome assembly.
Christian G. Murray,Thomas P. Larsson,Tobias Hill,Rikard Björklind,Robert Fredriksson,Helgi B. Schiöth +5 more
TL;DR: It is shown that clustering with the genome as a template outperforms sequence similarity methods used to create other EST clusters, such as the UniGene set, in respect to the extent ESTs originating from the same transcriptional unit are separated into disjunct clusters.
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Comprehensive comparisons of the current human, mouse, and rat RefSeq, Ensembl, EST, and FANTOM3 datasets: Identification of new human genes with specific tissue expression profile
Karl Nordström,Majd A.I. Mirza,Thomas P. Larsson,David E. Gloriam,Robert Fredriksson,Helgi B. Schiöth +5 more
TL;DR: The genetic elements in RefSeq, Ensembl, FANTOM3, HINV, and NCBI:s ESTdb are merged using the genome assemblies to achieve a comprehensive picture of the current status of the identity and gene number in human, mouse, and rat.
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