Simon Koren
9 Papers
39 Citations
Simon Koren is an academic researcher. The author has contributed to research in topics: Genome & Metagenomics. The author has an hindex of 5, co-authored 9 publications.
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Papers
High Similarity of Novel Orthoreovirus Detected in a Child Hospitalized with Acute Gastroenteritis to Mammalian Orthoreoviruses Found in Bats in Europe
Andrej Steyer,Ion Gutiérrez-Aguire,Marko Kolenc,Simon Koren,Denis Kutnjak,Marko Pokorn,Mateja Poljšak-Prijatelj,Nejc Rački,Maja Ravnikar,Martin Sagadin,Adela Fratnik Steyer,Nataša Toplak +11 more
TL;DR: It was shown that CIM monolithic chromatography alone is an efficient method for enriching the sample in viral particles before nucleic acid isolation and next-generation sequencing application, and the Slovenian SI-MRV01 isolate was most similar to an MRV found in a bat in Germany.
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Complete Genome Sequence of the Porcine Epidemic Diarrhea Virus Strain SLO/JH-11/2015
TL;DR: The complete genome sequence of PEDV strain SLO/JH-11/2015, obtained from a fecal sample of a fattening pig with diarrhea in September 2015, is closely related to recently detected European strains.
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Draft Genome Sequences of Dickeya sp. Isolates B16 (NIB Z 2098) and S1 (NIB Z 2099) Causing Soft Rot of Phalaenopsis Orchids.
TL;DR: The draft genome sequences of two Dickeya sp.
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De novo transcriptome of the pallial gland of the date mussel (Lithophaga lithophaga).
TL;DR: In this paper, transcriptome analysis of L. lithophaga revealed a set of candidate genes putatively associated with chemical boring, including Annexins, calreticulin, phospholipase A2 and V-type proton-ATPases.
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Transporters and Efflux Pumps Are the Main Mechanisms Involved in Staphylococcus epidermidis Adaptation and Tolerance to Didecyldimethylammonium Chloride.
Urška Ribič,Jernej Jakše,Nataša Toplak,Simon Koren,Minka Kovač,Anja Klančnik,Barbara Jeršek +6 more
- 29 Feb 2020
TL;DR: RNA-sequencing is used to investigate adaptation and tolerance mechanisms of S. epidermidis cleanroom strains, showing for the first time the differentially expressed genes in DDAC-adapted andDDAC-tolerant S. EpidermidIS strains, which highlight the complexity of the responses through the involvement of different mechanisms.
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