S. Hsu
6 Papers
2 Citations
S. Hsu is an academic researcher. The author has contributed to research in topics: Medicine & Epidemiology. The author has an hindex of 3, co-authored 6 publications.
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Papers
Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves
Benjamin B Lindsey,Christian Julian Villabona-Arenas,Finlay Campbell,Alexander J Keeley,Matthew Parker,Dhruv R. Shah,H. Parsons,Peijun Zhang,Nishchay Kakkar,M. Gallis,Benjamin Foulkes,P. Wolverson,S. Louka,Stella Christou,Amy State,Katie Johnson,Mohammad Raza,S. Hsu,Thibaut Jombart,Anne Cori,Thushan I de Silva,Alison Cope,Nasar Ali,Rasha Raghei,Joe Heffer,Nikki Smith,M. Whiteley,Manoj Baliram Pohare,Samantha Hansford,Luke R. Green,Dennis Wang,Michael Anckorn,Adrienn Angyal,Rebecca Brown,Hailey Hornsby,Mehmet Yavuz,Danielle C. Groves,Paul J. Parsons,Rachel Tucker,Magdalena B. Dabrowska,Thomas Saville,Jose Schutter,Matthew Wyles,Nicholas G. Carl A. B. Matthew Damien C. Sam Davies Pearson Quaife Tully Abbott,Nicholas G Davies,Carl A. B. Pearson,Matthew Quaife,Damien C. Tully,Sam Abbott,Cariad Evans,David G Partridge,Katherine E. Atkins,Stéphane Hué +52 more
TL;DR: In this article , the authors characterise within hospital transmission by combining viral genomic and epidemiological data using Bayesian modelling amongst 2181 patients and healthcare workers from a large UK NHS Trust.
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Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves
Benjamin B Lindsey,Christian Julian Villabona-Arenas,Finlay Campbell,Alexander J Keeley,Matthew Parker,Dhruv R. Shah,H.K. Parsons,Peijun Zhang,Nishchay Kakkar,M. Gallis,Benjamin Foulkes,P. Wolverson,S. Louka,Stella Christou,Amy State,Katie Johnson,Mohammad Raza,S. Hsu,Thibaut Jombart,Anne Cori,Cariad Evans,David G Partridge,Katherine E. Atkins,Stéphane Hué,Thushan I. Silva,Sheffield COVID-19 Genomics Group,The N3C Consortium,Cmmid COVID-19 working group +27 more
TL;DR: In this paper , the authors characterise within hospital transmission by combining viral genomic and epidemiological data using Bayesian modelling amongst 2181 patients and healthcare workers from a large UK NHS Trust.
Altered subgenomic RNA abundance provides unique insight into SARS-CoV-2 B.1.1.7/Alpha variant infections
Matthew Parker,Hazel Stewart,O. M. Shehata,Benjamin B Lindsey,Dhruv R. Shah,S. Hsu,Alexander J Keeley,David G Partridge,Shay Leary,Alison Cope,Amy State,Katie Johnson,Nasar Ali,Rasha Raghei,Joe Heffer,Nikki Smith,Peijun Zhang,M. Gallis,S. Louka,Hailey Hornsby,Hatoon Alamri,M. Whiteley,Benjamin Foulkes,Stella Christou,P. Wolverson,Manoj Baliram Pohare,Samantha Hansford,Luke R. Green,Cariad Evans,Mohammad Raza,Dennis Wang,Andrew E. Firth,James R. Edgar,Silvana Gaudieri,Simon Mallal,Mark O. Collins,Andrew A. Peden,Thushan I de Silva +37 more
TL;DR: In this article , the authors applied periscope to ARTIC Network Oxford Nanopore Technologies genomic sequencing data from 4400 SARS-CoV-2 positive clinical samples, and showed that normalised sgRNA is significantly increased in B.1.7 (alpha) infections (n = 879).
Population Normalization in SARS-CoV-2 Wastewater-Based Epidemiology: Implications from Statewide Wastewater Monitoring in Missouri
C. C. Li,Majid Bayati,S. Hsu,Hsiao-Ying Hsieh,W. Lindsi,Anthony M Belenchia,Sally A. Zemmer,J. Klutts,Martin Samuelson,M. Reynolds,Elizabeth S. Semkiw,H.-Y. Johnson,Tara Foley,C. Wieberg,Jeffrey D. Wenzel,Terri D. Lyddon,Mary LePique,Clayton A. Rushford,B. B. Salcedo,Kara Gardner Young,Maddie Graham,Reinier Suarez,Anthony Ford,Dagmara S. Antkiewicz,Kayley H. Janssen,Martin M. Shafer,M. Cecilia Johnson,C.-H. Lin +27 more
TL;DR: In this article, the authors identify a universal wastewater biomarker for population normalization for SARS-CoV-2 wastewater-based epidemiology (WBE) and compare three wastewater biomarkers, i.e., caffeine, paraxanthine, and pepper mild mottle virus (PMMoV), for WBE.
Publisher Correction: Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves
Benjamin B Lindsey,Christian Julian Villabona-Arenas,Finlay Campbell,Alexander J Keeley,Matthew Parker,Dhruv R. Shah,H. Parsons,Peijun Zhang,Nishchay Kakkar,M. Gallis,Benjamin Foulkes,P. Wolverson,S. Louka,Stella Christou,Amy State,Katie Johnson,Mohammad Raza,S. Hsu,Thibaut Jombart,Anne Cori,Thushan I de Silva,Alison Cope,Nasar Ali,Rasha Raghei,Joe Heffer,Nikki Smith,M. Whiteley,Manoj Baliram Pohare,Samantha Hansford,Luke R. Green,Dennis Wang,Michael Anckorn,Adrienn Angyal,Rebecca Brown,Hailey Hornsby,Mehmet Yavuz,Danielle C. Groves,Paul J. Parsons,Rachel Tucker,Magdalena B. Dabrowska,Thomas Saville,J.W. Schutter,Matthew Wyles,Cariad Evans,Nicholas G. Carl A. B. Matthew Damien C. Sam Davies Pearson Quaife Tully Abbott,Nicholas G Davies,Carl A. B. Pearson,Matthew Quaife,Damien C. Tully,Sam Abbott,David G Partridge,Katherine E. Atkins,Stéphane Hué +52 more