Ryan Doherty
University of Pennsylvania
3 Papers
Ryan Doherty is an academic researcher from University of Pennsylvania. The author has contributed to research in topics: Genome browser & Biology. The author has an hindex of 2, co-authored 3 publications. Previous affiliations of Ryan Doherty include Plant Genome Mapping Laboratory.
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Papers
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center.
Beatrice Amos,Cristina Aurrecoechea,Matthieu Barba,Ana Barreto,Evelina Y. Basenko,Wojciech Bażant,Robert Belnap,Ann Sizemore Blevins,Ulrike Böhme,John Brestelli,Brian P. Brunk,Mark X. Caddick,Danielle Callan,Lahcen I. Campbell,Mikkel B. Christensen,George K. Christophides,Kathryn Crouch,Kristina Davis,Jeremy D. DeBarry,Ryan Doherty,Yikun Duan,Michael J. Dunn,Dave Falke,Steve Fisher,Paul Flicek,Brett Fox,Bindu Gajria,Gloria I. Giraldo-Calderón,Gloria I. Giraldo-Calderón,Omar S. Harb,Elizabeth Harper,Christiane Hertz-Fowler,Mark J Hickman,Connor Howington,Sufen Hu,Jay C. Humphrey,John Iodice,Andrew M. Jones,John Judkins,Sarah A. Kelly,Jessica C. Kissinger,Dae Kun Kwon,Kristopher Lamoureux,Daniel Lawson,Wei Li,Kallie Lies,Disha Lodha,Jamie Long,Robert M. MacCallum,Gareth Maslen,Mary Ann McDowell,Jaroslaw Nabrzyski,David S. Roos,Samuel S. C. Rund,Stephanie Wever Schulman,Achchuthan Shanmugasundram,Vasily Sitnik,Drew Spruill,David Starns,Christian J. Stoeckert,Sheena Shah Tomko,Haiming Wang,Susanne Warrenfeltz,Robert Wieck,Paul A Wilkinson,Lin Xu,Jie Zheng +66 more
TL;DR: The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB, https://veupathdb.org) represents the 2019 merger of VectorBase with the EuPath database as mentioned in this paper.
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EuPathDB: the eukaryotic pathogen genomics database resource.
Cristina Aurrecoechea,Ana Barreto,Evelina Y. Basenko,John Brestelli,Brian P. Brunk,Shon Cade,Kathryn Crouch,Ryan Doherty,Dave Falke,Steve Fischer,Bindu Gajria,Omar S. Harb,Mark Heiges,Christiane Hertz-Fowler,Sufen Hu,John Iodice,Jessica C. Kissinger,Cris Lawrence,Wei Li,Deborah F. Pinney,Jane A. Pulman,David S. Roos,Achchuthan Shanmugasundram,Fatima Silva-Franco,Sascha Steinbiss,Christian J. Stoeckert,Drew Spruill,Haiming Wang,Susanne Warrenfeltz,Jie Zheng +29 more
TL;DR: EuPathDB is updated with numerous new analysis tools, features, data sets and data types, and Forthcoming upgrades include user workspaces for private integration of data with existing Eu pathogen data and improved integration and presentation of host–pathogen interactions.
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EuPathDB: The Eukaryotic Pathogen database
Cristina Aurrecoechea,Ana Barreto,John Brestelli,Brian P. Brunk,Shon Cade,Ryan Doherty,Steve Fischer,Bindu Gajria,Xin Gao,Alan R. Gingle,Gregory R. Grant,Omar S. Harb,Mark Heiges,Sufen Hu,John Iodice,Jessica C. Kissinger,Eileen Kraemer,Wei Li,Deborah F. Pinney,Brian Pitts,David S. Roos,Ganesh Srinivasamoorthy,Christian J. Stoeckert,Haiming Wang,Susanne Warrenfeltz +24 more
TL;DR: EuPathDB (http://eupathdb.org) resources include 11 databases supporting eukaryotic pathogen genomic and functional genomic data, isolate data and phylogenomics as mentioned in this paper.