Robert Terrell
University of Washington
5 Papers
170 Citations
Robert Terrell is an academic researcher from University of Washington. The author has contributed to research in topics: Regulation of gene expression & Biology. The author has an hindex of 4, co-authored 5 publications. Previous affiliations of Robert Terrell include University of Chicago.
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Papers
Comparative analysis of regulatory information and circuits across distant species
Alan P. Boyle,Carlos L. Araya,Cathleen M. Brdlik,Philip Cayting,Chao Cheng,Yong Cheng,Kathryn E. Gardner,LaDeana W. Hillier,J. Janette,Lixia Jiang,Dionna M. Kasper,Trupti Kawli,Pouya Kheradpour,Anshul Kundaje,Anshul Kundaje,Jingyi Jessica Li,Jingyi Jessica Li,Lijia Ma,Wei Niu,E. Jay Rehm,Joel Rozowsky,Matthew Slattery,Rebecca Spokony,Robert Terrell,D. Vafeados,Daifeng Wang,Peter Weisdepp,Yi-Chieh Wu,Dan Xie,Koon-Kiu Yan,Elise A. Feingold,Peter J. Good,Michael J. Pazin,Haiyan Huang,Peter J. Bickel,Steven E. Brenner,Valerie Reinke,Robert H. Waterston,Mark Gerstein,Kevin P. White,Manolis Kellis,Michael Snyder +41 more
TL;DR: The results suggest that gene-regulatory properties previously observed for individual factors are general principles of metazoan regulation that are remarkably well-preserved despite extensive functional divergence of individual network connections.
The modERN Resource: Genome-Wide Binding Profiles for Hundreds of Drosophila and Caenorhabditis elegans Transcription Factors
Michelle M. Kudron,Alec Victorsen,Louis Gevirtzman,LaDeana W. Hillier,William W. Fisher,D. Vafeados,Matt Kirkey,Ann S. Hammonds,Jeffery Gersch,Haneen N. Ammouri,Martha Wall,Jennifer L. Moran,David Steffen,Matt Szynkarek,Samantha Seabrook-Sturgis,Nader Jameel,Madhura Kadaba,Jaeda Patton,Robert Terrell,Mitch Corson,Timothy Durham,Soo Park,Swapna Samanta,Mei Han,Jinrui Xu,Koon-Kiu Yan,Susan E. Celniker,Kevin P. White,Lijia Ma,Mark Gerstein,Valerie Reinke,Robert H. Waterston +31 more
TL;DR: These data will facilitate a vast number of scientific inquiries into the function of individual TFs in key developmental, metabolic, and defense and homeostatic regulatory pathways, as well as provide a broader perspective on how individualTFs work together in local networks and globally across the life spans of these two key model organisms.
Comparative analysis of regulatory information and circuits across distant species
Alan P. Boyle,Carlos L. Araya,Cathleen M. Brdlik,Philip Cayting,Chao Cheng,Yong Cheng,Kathryn E. Gardner,LaDeana W. Hillier,J. Janette,Lixia Jiang,Dionna M. Kasper,Trupti Kawli,Pouya Kheradpour,Anshul Kundaje,Anshul Kundaje,Jingyi Jessica Li,Jingyi Jessica Li,Lijia Ma,Wei Niu,E. Jay Rehm,Joel Rozowsky,Matthew Slattery,Rebecca Spokony,Robert Terrell,D. Vafeados,Daifeng Wang,Peter Weisdepp,Yi-Chieh Wu,Dan Xie,Koon-Kiu Yan,Elise A. Feingold,Peter J. Good,Michael J. Pazin,Haiyan Huang,Peter J. Bickel,Steven E. Brenner,Valerie Reinke,Robert H. Waterston,Mark Gerstein,Kevin P. White,Manolis Kellis,Michael Snyder +41 more
- 01 Aug 2014
TL;DR: In this article, the genome-wide binding locations of 165 human, 93 worm and 52 fly transcription regulatory factors were mapped for a total of 1,019 data sets from diverse cell types, developmental stages, or conditions in the three species, of which 498 (48.9%) are presented here for the first time.
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Corrigendum: Regulatory analysis of the C. elegans genome with spatiotemporal resolution.
Carlos L. Araya,Trupti Kawli,Anshul Kundaje,Lixia Jiang,Beijing Wu,D. Vafeados,Robert Terrell,Peter Weissdepp,Louis Gevirtzman,Daniel L. Mace,Wei Niu,Alan P. Boyle,Dan Xie,Lijia Ma,John I. Murray,Valerie Reinke,Robert H. Waterston,Michael Snyder +17 more
TL;DR: In this paper, the gene label ZK337.2 (KLU-1, a C2H2 Zn-finger protein) was mis-transcribed to ZK377.2, a neuronal fate regulator.
Regulatory analysis of the C. elegans genome with spatiotemporal resolution
Carlos L. Araya,Trupti Kawli,Anshul Kundaje,Lixia Jiang,Beijing Wu,D. Vafeados,Robert Terrell,Peter Weissdepp,Louis Gevirtzman,Daniel L. Mace,Wei Niu,Alan P. Boyle,Dan Xie,Lijia Ma,John I. Murray,Valerie Reinke,Robert H. Waterston,Michael Snyder +17 more
TL;DR: This work determined the genomic distribution of binding sites for 92 transcription factors and regulatory proteins across multiple stages of Caenorhabditis elegans development by performing 241 ChIP-seq (chromatin immunoprecipitation followed by sequencing) experiments and produced a spatiotemporally resolved metazoan transcription factor binding map.