Luis David Alcaraz
National Autonomous University of Mexico
71 Papers
98 Citations
Luis David Alcaraz is an academic researcher from National Autonomous University of Mexico. The author has contributed to research in topics: Biology & Microbiome. The author has an hindex of 19, co-authored 63 publications. Previous affiliations of Luis David Alcaraz include CINVESTAV & Instituto Politécnico Nacional.
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Papers
Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
Christian P. Kubicek,Alfredo Herrera-Estrella,Verena Seidl-Seiboth,Diego Martinez,Irina S. Druzhinina,Michael R. Thon,Susanne Zeilinger,Sergio Casas-Flores,Benjamin A. Horwitz,Prasun K. Mukherjee,Mala Mukherjee,László Kredics,Luis David Alcaraz,Andrea Aerts,Zsuzsanna Antal,Lea Atanasova,Mayte G Cervantes-Badillo,Jean F. Challacombe,Olga Chertkov,Kevin McCluskey,Fanny Coulpier,Nandan P. Deshpande,Hans von Döhren,Daniel J. Ebbole,Edgardo Ulises Esquivel-Naranjo,Erzsébet Fekete,Michel Flipphi,Fabian Glaser,Elida Yazmin Gomez-Rodriguez,Sabine Gruber,Cliff Han,Bernard Henrissat,Rosa Hermosa,Miguel Ángel Hernández-Oñate,Levente Karaffa,Idit Kosti,Stéphane Le Crom,Erika Lindquist,Susan Lucas,Mette Lübeck,Peter Stephensen Lübeck,Antoine Margeot,Benjamin Metz,Monica Misra,Helena Nevalainen,Markus Omann,Nicolle H. Packer,Giancarlo Perrone,Edith Elena Uresti-Rivera,Asaf Salamov,Monika Schmoll,Bernhard Seiboth,Harris Shapiro,Serenella A. Sukno,Juan Antonio Tamayo-Ramos,Doris Tisch,Aric Wiest,Heather H. Wilkinson,Michael Zhang,Pedro M. Coutinho,Charles M. Kenerley,Enrique Monte,Scott E. Baker,Scott E. Baker,Igor V. Grigoriev +64 more
TL;DR: A better understanding of mycoparasitism is offered, and the development of improved biocontrol strains for efficient and environmentally friendly protection of plants is enforced.
The oral metagenome in health and disease
Pedro Belda-Ferre,Luis David Alcaraz,Raúl Cabrera-Rubio,Héctor Romero,Aurea Simon-Soro,Miguel Pignatelli,Alex Mira +6 more
TL;DR: The metagenome of the human oral cavity under health and diseased conditions is described for the first time, with a focus on supragingival dental plaque and cavities, indicating that the oral cavity is functionally a different environment from the gut, with many functional categories enriched in one of the two environments and depleted in the other.
Understanding the Evolutionary Relationships and Major Traits of Bacillus through Comparative Genomics
Luis David Alcaraz,Gabriel Moreno-Hagelsieb,Luis E. Eguiarte,Valeria Souza,Luis Herrera-Estrella,Gabriela Olmedo +5 more
TL;DR: The aquatic Bacilli are defined here for the first time as a group through the phylogenetic analysis of 814 genes that comprise the core genome, using a core genome and pan-genome to provide insight into phylogeny and function that would otherwise be difficult to achieve.
A tissue-dependent hypothesis of dental caries.
TL;DR: The results support a scenario in which pH and diet are determinants of the disease during the degradation of enamel, but in dentin caries lesions not only acidogenic but also proteolytic bacteria are involved.
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The genome of Bacillus coahuilensis reveals adaptations essential for survival in the relic of an ancient marine environment
Luis David Alcaraz,Gabriela Olmedo,German Bonilla,René Cerritos,Gustavo Hernández,Alfredo Cruz,Enrique Ramirez,Catherine Putonti,Beatriz Jiménez,Eva María Salinas Martinez,Varinia López,Jacqueline L. Arvizu,Francisco J. Ayala,Francisco Razo,Juan Caballero,Janet L. Siefert,Luis E. Eguiarte,Jean-Philippe Vielle,Octavio Martínez,Valeria Souza,Alfredo Herrera-Estrella,Luis Herrera-Estrella +21 more
TL;DR: It is proposed that the size and complexity of the B. coahuilensis genome reflects the adaptation of an ancient marine bacterium to a novel environment, providing support to a “marine isolation origin hypothesis” that is consistent with the geology of CCB.
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