Krishna Tiwari
7 Papers
Krishna Tiwari is an academic researcher. The author has contributed to research in topics: Ensembl & KEGG. The author has co-authored 1 publications.
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Papers
The Reactome Pathway Knowledgebase 2024.
Marija Milacic,Deidre Beavers,P. Conley,Chuqiao Gong,Marc Gillespie,Johannes Griss,Robin Haw,Bijay Jassal,Lisa Matthews,Bruce May,Robert Petryszak,Eliot Ragueneau,Karen Rothfels,Cristoffer Sevilla,Veronica Shamovsky,Ralf Stephan,Krishna Tiwari,Thawfeek M. Varusai,Joel Weiser,Adam Wright,Guanming Wu,Lincoln Stein,H. Hermjakob,Peter D'Eustachio +23 more
TL;DR: Progress towards annotation of the entire human proteome, targeted annotation of disease-causing genetic variants of proteins and of small-molecule drugs in a pathway context, and towards supporting explicit annotation of cell- and tissue-specific pathways are reviewed.
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Using the Reactome Database
Karen Rothfels,Marija Milacic,Lisa Matthews,Robin Haw,Cristoffer Sevilla,Marc Gillespie,Ralf Stephan,Chuqiao Gong,Eliot Ragueneau,Bruce May,Veronica Shamovsky,Adam Wright,Joel Weiser,Deidre Beavers,P. Conley,Krishna Tiwari,Bijay Jassal,Johannes Griss,Andrea Senff-Ribeiro,Timothy Brunson,Robert Petryszak,Henning Hermjakob,Peter D'Eustachio,Lincoln Stein +23 more
TL;DR: The Reactome project as mentioned in this paper is a pathway database that collects detailed information on biological pathways and processes in humans from the primary literature, covering the gamut from simple intermediate metabolism to signaling pathways and complex cellular events.
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Pathway-based, reaction-specific annotation of disease variants for elucidation of molecular phenotypes.
Marija Orlic-Milacic,Karen Rothfels,Lisa Matthews,Adam Wright,Bijay Jassal,Veronica Shamovsky,Quang Trinh,Marc E Gillespie,Cristoffer Sevilla,Krishna Tiwari,Eliot Ragueneau,Chuqiao Gong,Ralf Stephan,Bruce May,Robin Haw,Joel Weiser,Deidre Beavers,P. Conley,H. Hermjakob,Lincoln D. Stein,Peter D'Eustachio,Guanming Wu +21 more
- 01 Jan 2023
TL;DR: Pathway-based, reaction-specific annotation of disease variants provides a standardized overview of molecular phenotypes of pathogenic variants that is amenable to computational mining and mathematical modeling.
1
The Reactome Knowledgebase 2026
Eliot Ragueneau,Chuqiao Gong,Pierre Sinquin,Cristoffer Sevilla,Deidre Beavers,A. Grentner,Johannes Griss,Gregory F J Hogue,Nancy T Li,Lisa Matthews,Bruce May,Marija Milacic,Helia Mohammadi,Robert Petryszak,Karen Rothfels,Veronica Shamovsky,Ralf Stephan,Krishna Tiwari,Joel Weiser,Adam Wright,Marc Gillespie,Guanming Wu,Lincoln Stein,H. Hermjakob,Peter D’Eustachio +24 more
Advancing curation of viral life cycles, host interactions, and therapeutics in Reactome
Lisa Matthews,Justin Cook,Ralf Stephan,Marija Milacic,Karen Rothfels,Veronica Shamovsky,Bijay Jassal,Robin Haw,Cristoffer Sevilla,Chuqiao Gong,Eliot Ragueneau,Bruce May,Adam Wright,Joel Weiser,Deidre Beavers,Krishna Tiwari,Andrea Senff‐Ribeiro,Thawfeek M. Varusai,Henning Hermjakob,Peter D'Eustachio,Guanming Wu,Lincoln Stein,Marc E Gillespie +22 more