Precision animal agriculture is poised to rise to prominence in the livestock enterprise in the domains of management, production, welfare, sustainability, health surveillance, and environmental footprint. Considerable progress has been made in the use of tools to routinely monitor and collect information from animals and farms in a less laborious manner than before. These efforts have enabled the animal sciences to embark on information technology-driven discoveries to improve animal agriculture. However, the growing amount and complexity of data generated by fully automated, high-throughput data recording or phenotyping platforms, including digital images, sensor and sound data, unmanned systems, and information obtained from real-time noninvasive computer vision, pose challenges to the successful implementation of precision animal agriculture. The emerging fields of machine learning and data mining are expected to be instrumental in helping meet the daunting challenges facing global agriculture. Yet, their impact and potential in "big data" analysis have not been adequately appreciated in the animal science community, where this recognition has remained only fragmentary. To address such knowledge gaps, this article outlines a framework for machine learning and data mining and offers a glimpse into how they can be applied to solve pressing problems in animal sciences.

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BIG DATA ANALYTICS AND PRECISION ANIMAL AGRICULTURE SYMPOSIUM: Machine learning and data mining advance predictive big data analysis in precision animal agriculture.

Cattle segmentation and contour extraction based on Mask R-CNN for precision livestock farming

Intelligent perception for cattle monitoring: A review for cattle identification, body condition score evaluation, and weight estimation

Computer Vision, Digital Image Processing, and Digital Image Analysis can be viewed as an amalgam of terms that very often are used to describe similar processes. Most of this confusion arises because these are interconnected fields that emerged with the development of digital image acquisition. Thus, there is a need to understand the connection between these fields, how a digital image is formed, and the differences regarding the many sensors available, each best suited for different applications. From the advent of the charge-coupled devices demarking the birth of digital imaging, the field has advanced quite fast. Sensors have evolved from grayscale to color with increasingly higher resolution and better performance. Also, many other sensors have appeared, such as infrared cameras, stereo imaging, time of flight sensors, satellite, and hyperspectral imaging. There are also images generated by other signals, such as sound (ultrasound scanners and sonars) and radiation (standard x-ray and computed tomography), which are widely used to produce medical images. In animal and veterinary sciences, these sensors have been used in many applications, mostly under experimental conditions and with just some applications yet developed on commercial farms. Such applications can range from the assessment of beef cuts composition to live animal identification, tracking, behavior monitoring, and measurement of phenotypes of interest, such as body weight, condition score, and gait. Computer vision systems (CVS) have the potential to be used in precision livestock farming and high-throughput phenotyping applications. We believe that the constant measurement of traits through CVS can reduce management costs and optimize decision-making in livestock operations, in addition to opening new possibilities in selective breeding. Applications of CSV are currently a growing research area and there are already commercial products available. However, there are still challenges that demand research for the successful development of autonomous solutions capable of delivering critical information. This review intends to present significant developments that have been made in CVS applications in animal and veterinary sciences and to highlight areas in which further research is still needed before full deployment of CVS in breeding programs and commercial farms.

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Image Analysis and Computer Vision Applications in Animal Sciences: An Overview.

Estimating body weight, body condition score, and type traits in dairy cows using three dimensional cameras and manual body measurements

The use of digital images could be a faster and cheaper alternative technique to assess BW, HCW, and body composition of beef cattle. The objective of this study was to develop equations to predict body and carcass weight and body fat content of young bulls using digital images obtained through a Microsoft Kinect device. Thirty-five bulls with an initial BW of 383 (±5.38) kg (20 Black Angus, 390 [±7.48] kg initial BW, and 15 Nellore, 377 [±8.66] kg initial BW) were used. The Kinect sensor, installed on the top of a cattle chute, was used to take infrared light-based depth videos, recorded before the slaughter. For each animal, a quality control was made, running and pausing the video at the moment that the animal was standing with its body and head in line. One frame from recorded videos was selected and used to analyze the following body measurements: chest width, thorax width, abdomen width, body length, dorsal height, and dorsal area. From these body measurements, 23 indexes were generated and tested as potential predictors. The BW and HCW were assessed with a digital scale, whereas empty body fat (EBF) was estimated through ground samples of all tissues. To better understand the relationship among the measurements, the correlations between final BW (488 [±10.4] kg), HCW (287 [±12.5] kg), EBF (14 [±0.610] % empty BW) content, body measurements (taken through digital images), and developed indexes were evaluated. The REG procedure was used to develop the regressions, and the important independent variables were identified using the options STEPWISE and Mallow's Cp in the SELECTION statement. Chest width was the trait most related to weights and the correlations between this measurement and BW and HCW were above 0.85. The analysis of linear regressions between observed and predicted values showed that all models pass through the origin and have a slope of unity (null hypothesis [H]: = 0 and = 1; ≥ 0.993). The models to estimate BW and HCW of Angus and Nellore presented between 0.69 and 0.84 ( < 0.001), whereas from equations to estimate the EBF were lower ( = 0.43-0.45; ≤ 0.006). Index I5 [(chest width) × body length], related to the animal volume, was significant in all models created to estimate BW and HCW, and it explained more than 70% of the variation. This study indicates that digital images taken through a Microsoft Kinect system have the potential to be used as a tool to estimate body and carcass weight of beef cattle.

Technical note: Estimating body weight and body composition of beef cattle trough digital image analysis.

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Technical note: Estimating body weight and body composition of beef cattle trough digital image analysis.