David Wojnar
University of Tübingen
5 Papers
4 Citations
David Wojnar is an academic researcher from University of Tübingen. The author has contributed to research in topics: Proteome & Bioconductor. The author has an hindex of 3, co-authored 5 publications.
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Papers
OpenMS: a flexible open-source software platform for mass spectrometry data analysis
Hannes L. Röst,Hannes L. Röst,Timo Sachsenberg,Stephan Aiche,Chris Bielow,Hendrik Weisser,Fabian Aicheler,Sandro Andreotti,Hans-Christian Ehrlich,Petra Gutenbrunner,Erhan Kenar,Xiao Liang,Sven Nahnsen,Lars Nilse,Julianus Pfeuffer,George Rosenberger,Marc Rurik,Uwe Schmitt,Johannes Veit,Mathias Walzer,David Wojnar,Witold Wolski,Oliver Schilling,Jyoti S. Choudhary,Lars Malmström,Lars Malmström,Ruedi Aebersold,Ruedi Aebersold,Knut Reinert,Knut Reinert,Oliver Kohlbacher +30 more
TL;DR: OpenMS 2.0 is presented, a robust, open-source, cross-platform software specifically designed for the flexible and reproducible analysis of high-throughput MS data.
Learning from heterogeneous data sources: an application in spatial proteomics
Lisa M. Breckels,Sean B. Holden,David Wojnar,Claire M. Mulvey,Andy Christoforou,Arnoud J. Groen,Oliver Kohlbacher,Kathryn S. Lilley,Laurent Gatto +8 more
TL;DR: A unique transfer learning classification framework is presented that utilises a nearest-neighbour or support vector machine system, to integrate heterogeneous data sources to considerably improve on the quantity and quality of sub-cellular protein assignment.
qPortal - A science gateway for biomedical applications.
Christopher Mohr,Andreas Friedrich,David Wojnar,Erhan Kenar,Aydin Can Polatkan,Marius Cosmin Codrea,Stefan Czemmel,Oliver Kohlbacher,Oliver Kohlbacher,Sven Nahnsen +9 more
- 01 Mar 2017
TL;DR: The qPortal as discussed by the authors is a web-based science gateway providing users with an intuitive way to manage and analyze quantitative biological data, including pre-programmed analysis pipelines, quality control workflows, and visualization tools.
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qPortal: A platform for data-driven biomedical research.
Christopher Mohr,Andreas Friedrich,David Wojnar,Erhan Kenar,Aydin Can Polatkan,Marius Cosmin Codrea,Stefan Czemmel,Oliver Kohlbacher,Oliver Kohlbacher,Sven Nahnsen +9 more
TL;DR: qPortal, a one-stop-shop solution for biomedical projects offers up-to-date analysis pipelines, quality control workflows, and visualization tools, and integration of project and data management as well as workflow resources in one place present clear advantages over existing solutions.
Learning from Heterogeneous Data Sources: An Application in Spatial Proteomics.
Lisa M. Breckels,Sean B. Holden,David Wojnar,Claire M. Mulvey,Andy Christoforou,Arnoud J. Groen,Matthew Trotter,Oliver Kohlbacher,Oliver Kohlbacher,Kathryn S. Lilley,Laurent Gatto +10 more
TL;DR: A unique transfer learning classification framework is presented that utilises a nearest-neighbour or support vector machine system, to integrate heterogeneous data sources to considerably improve on the quantity and quality of sub-cellular protein assignment.