The processing of raw data from modern astronomical instruments is often carried out nowadays using dedicated software, known as pipelines, largely run in automated operation. In this paper we describe the data reduction pipeline of the Multi Unit Spectroscopic Explorer (MUSE) integral field spectrograph operated at the ESO Paranal Observatory. This spectrograph is a complex machine: it records data of 1152 separate spatial elements on detectors in its 24 integral field units. Efficiently handling such data requires sophisticated software with a high degree of automation and parallelization. We describe the algorithms of all processing steps that operate on calibrations and science data in detail, and explain how the raw science data is transformed into calibrated datacubes. We finally check the quality of selected procedures and output data products, and demonstrate that the pipeline provides datacubes ready for scientific analysis.

/pdf/the-data-processing-pipeline-for-the-muse-instrument-3ccae6nu52.pdf

The data processing pipeline for the MUSE instrument

We present a spectrally and temporally resolved detection of the optical Mg I triplet at 7.8$\sigma$ in the extended atmosphere of the ultra-hot Jupiter KELT-9 b, adding to the list of detected metal species in the hottest gas giant currently known. Constraints are placed on the density and radial extent of the excited hydrogen envelope using simultaneous observations of H$\alpha$ and H$\beta$ under the assumption of a spherically symmetric atmosphere. We find that planetary rotational broadening of $v_\text{rot} = 8.2^{+0.6}_{-0.7}$ km s$^{-1}$ is necessary to reproduce the Balmer line transmission profile shapes, where the model including rotation is strongly preferred over the non-rotating model using a Bayesian information criterion comparison. The time-series of both metal line and hydrogen absorption show remarkable structure, suggesting that the atmosphere observed during this transit is dynamic rather than static. We detect a relative emission feature near the end of the transit which exhibits a P-Cygni-like shape, evidence of material moving at $\approx 50-100$ km s$^{-1}$ away from the planet. We hypothesize that the in-transit variability and subsequent P-Cygni-like profiles are due to a flaring event that caused the atmosphere to expand, resulting in unbound material being accelerated to high speeds by stellar radiation pressure. Further spectroscopic transit observations will help establish the frequency of such events.

Atmospheric dynamics and the variable transit of KELT-9 b

Context. Full-disk solar flux spectra can be directly compared to stellar spectra and thereby serve as our most important reference source for, for example stellar chemical abundances, magnetic activity phenomena, radial-velocity signatures or global pulsations.Aim. As part of the first Potsdam Echelle Polarimetric and Spectroscopic Instrument (PEPSI) key-science project, we aim to provide well-exposed and average-combined (viz. deep) high-resolution spectra of representative stellar targets. Such deep spectra contain an overwhelming amount of information, typically much more than what could be analyzed and discussed within a single publication. Therefore, these spectra will be made available in form of (electronic) atlases. The first star in this series of papers is our Sun. It also acts as a system-performance cornerstone.Methods. The Sun was monitored with PEPSI at the Large Binocular Telescope (LBT). Instead of the LBT we used a small robotic solar disk integration (SDI) telescope. The deep spectra in this paper are the results of combining up to ≈100 consecutive exposures per wavelength setting and are compared with other solar flux atlases.Results. Our software for the optimal data extraction and reduction of PEPSI spectra is described and verified with the solar data. Three deep solar flux spectra with a spectral resolution of up to 270 000, a continuous wavelength coverage from 383 nm to 914 nm, and a photon signal to noise ratio (S/N) of between 2000–8000:1 depending on wavelength are presented. Additionally, a time-series of 996 high-cadence spectra in one cross disperser is used to search for intrinsic solar modulations. The wavelength calibration based on Th-Ar exposures and simultaneous Fabry–Perot combs enables an absolute wavelength solution within 10 m s−1 (rms) with respect to the HARPS laser-comb solar atlas and a relative rms of 1.2 m s−1 for one day. For science demonstration, we redetermined the disk-average solar Li abundance to 1.09 ± 0.04 dex on the basis of 3D NLTE model atmospheres. We detected disk-averaged p -mode RV oscillations with a full amplitude of 47 cm s−1 at 5.5 min.Conclusions. Comparisons with two solar FTS atlases, as well as with the HARPS solar atlas, validate the PEPSI data product. Now, PEPSI/SDI solar-flux spectra are being taken with a sampling of one deep spectrum per day, and are supposed to continue a full magnetic cycle of the Sun.

/pdf/pepsi-deep-spectra-i-the-sun-as-a-star-5d98l1z97a.pdf

PEPSI deep spectra. I. The Sun-as-a-star

https://iopscience.iop.org/article/10.3847/1538-3881/aaf725/pdf

Atmospheric Dynamics and the Variable Transit of KELT-9 b

Processing of raw data from modern astronomical instruments is nowadays often carried out using dedicated software, so-called "pipelines" which are largely run in automated operation. In this paper we describe the data reduction pipeline of the Multi Unit Spectroscopic Explorer (MUSE) integral field spectrograph operated at ESO's Paranal observatory. This spectrograph is a complex machine: it records data of 1152 separate spatial elements on detectors in its 24 integral field units. Efficiently handling such data requires sophisticated software, a high degree of automation and parallelization. We describe the algorithms of all processing steps that operate on calibrations and science data in detail, and explain how the raw science data gets transformed into calibrated datacubes. We finally check the quality of selected procedures and output data products, and demonstrate that the pipeline provides datacubes ready for scientific analysis.

/pdf/the-data-processing-pipeline-for-the-muse-instrument-5019dt8ce4.pdf

The Data Processing Pipeline for the MUSE Instrument

PEPSI is the bench-mounted, two-arm, fibre-fed and stabilized Potsdam Echelle Polarimetric and Spectroscopic Instrument for the 2x8.4 m Large Binocular Telescope (LBT). Three spectral resolutions of either 43 000, 120 000 or 270 000 can cover the entire optical/red wavelength range from 383 to 907 nm in three exposures. Two 10.3kx10.3k CCDs with 9-{\mu}m pixels and peak quantum efficiencies of 96 % record a total of 92 echelle orders. We introduce a new variant of a wave-guide image slicer with 3, 5, and 7 slices and peak efficiencies between 96 %. A total of six cross dispersers cover the six wavelength settings of the spectrograph, two of them always simultaneously. These are made of a VPH-grating sandwiched by two prisms. The peak efficiency of the system, including the telescope, is 15% at 650 nm, and still 11% and 10% at 390 nm and 900 nm, respectively. In combination with the 110 m2 light-collecting capability of the LBT, we expect a limiting magnitude of 20th mag in V in the low-resolution mode. The R=120 000 mode can also be used with two, dual-beam Stokes IQUV polarimeters. The 270 000-mode is made possible with the 7-slice image slicer and a 100- {\mu}m fibre through a projected sky aperture of 0.74", comparable to the median seeing of the LBT site. The 43000-mode with 12-pixel sampling per resolution element is our bad seeing or faint-object mode. Any of the three resolution modes can either be used with sky fibers for simultaneous sky exposures or with light from a stabilized Fabry-Perot etalon for ultra-precise radial velocities. CCD-image processing is performed with the dedicated data-reduction and analysis package PEPSI-S4S. A solar feed makes use of PEPSI during day time and a 500-m feed from the 1.8 m VATT can be used when the LBT is busy otherwise. In this paper, we present the basic instrument design, its realization, and its characteristics.

PEPSI: The high-resolution echelle spectrograph and polarimeter for the Large Binocular Telescope

PEPSI is the bench-mounted, two-arm, fibre-fed and stabilized Potsdam Echelle Polarimetric and Spectroscopic Instrument for the 2×8.4 m Large Binocular Telescope (LBT). Three spectral resolutions of either 43 000, 120 000 or 270 000 can cover the entire optical/red wavelength range from 383 to 907 nm in three exposures. Two 10.3k×10.3k CCDs with 9-µm pixels and peak quantum efficiencies of 94–96 % record a total of 92 echelle orders. We introduce a new variant of a wave-guide image slicer with 3, 5, and 7 slices and peak efficiencies between 92–96 %. A total of six cross dispersers cover the six wavelength settings of the spectrograph, two of them always simultaneously. These are made of a VPH-grating sandwiched by two prisms. The peak efficiency of the system, including the telescope, is 15 % at 650 nm, and still 11 % and 10 % at 390 nm and 900 nm, respectively. In combination with the 110 m2 light-collecting capability of the LBT, we expect a limiting magnitude of ≈20th mag in V in the low-resolution mode. The R = 120 000 mode can also be used with two, dual-beam Stokes IQUV polarimeters. The 270 000-mode is made possible with the 7-slice image slicer and a 100-µm fibre through a projected sky aperture of 0.74″, comparable to the median seeing of the LBT site. The 43 000-mode with 12-pixel sampling per resolution element is our bad seeing or faint-object mode. Any of the three resolution modes can either be used with sky fibers for simultaneous sky exposures or with light from a stabilized Fabry-Perot etalon for ultra-precise radial velocities. CCD-image processing is performed with the dedicated data-reduction and analysis package PEPSI-S4S. Its full error propagation through all image-processing steps allows an adaptive selection of parameters by using statistical inferences and robust estimators. A solar feed makes use of PEPSI during day time and a 500-m feed from the 1.8 m VATT can be used when the LBT is busy otherwise. In this paper, we present the basic instrument design, its realization, and its characteristics. Some pre-commissioning first-light spectra shall demonstrate the basic functionality. (© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim)

PEPSI: The high-resolution ichelle spectrograph and polarimeter for the Large Binocular Telescope

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PEPSI: The high-resolution echelle spectrograph and polarimeter for the Large Binocular Telescope

PEPSI: The high-resolution ichelle spectrograph and polarimeter for the Large Binocular Telescope