Christopher D. Garay
Mitre Corporation
6 Papers
5 Citations
Christopher D. Garay is an academic researcher from Mitre Corporation. The author has contributed to research in topics: Gene expression & Data management. The author has an hindex of 3, co-authored 5 publications. Previous affiliations of Christopher D. Garay include Boston University.
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Papers
The Mycobacterium tuberculosis regulatory network and hypoxia.
James E. Galagan,Kyle J. Minch,Matthew W. Peterson,Anna Lyubetskaya,Elham Azizi,Linsday Sweet,Antonio L.C. Gomes,Tige R. Rustad,Gregory Dolganov,Irina Glotova,Thomas Abeel,Thomas Abeel,Chris Mahwinney,Adam D. Kennedy,Rene Allard,William Brabant,Andrew S Krueger,Suma Jaini,Brent Honda,Wen-Han Yu,Mark J. Hickey,Jeremy Zucker,Christopher D. Garay,Brian Weiner,Peter Sisk,Christian Stolte,Jessica K. Winkler,Yves Van de Peer,Paul Iazzetti,Diogo M. Camacho,Jonathan M. Dreyfuss,Yang Liu,Anca Dorhoi,Hans-Joachim Mollenkopf,Paul Drogaris,Julie Lamontagne,Yiyong Zhou,Julie Piquenot,Sang Tae Park,Sahadevan Raman,Stefan H. E. Kaufmann,Robert P. Mohney,Daniel Chelsky,D. Branch Moody,David R. Sherman,David R. Sherman,Gary K. Schoolnik +46 more
TL;DR: The first steps towards a complete reconstruction of the Mycobacterium tuberculosis regulatory network based on ChIP-Seq are taken and system-wide profiling of messenger RNAs, proteins, metabolites and lipids during hypoxia and re-aeration is combined.
Metabolic modeling predicts metabolite changes in Mycobacterium tuberculosis.
TL;DR: E-flux-MFC can be used to study global changes in MTB metabolites from gene expression data associated with environmental and genetic perturbations and provides a resource for studying the large number of TFs whose functions remain unknown.
Pathogen metadata platform: software for accessing and analyzing pathogen strain information.
TL;DR: A platform to easily access and summarize data about pathogen samples, which enables users to create a local database for pathogen metadata, populate it with data from NCBI, easily query the data, and obtain visual summaries.
•Posted Content
Hallmarks of Human-Machine Collaboration: A framework for assessment in the DARPA Communicating with Computers Program.
Robyn Kozierok,John S. Aberdeen,Cheryl Clark,Christopher D. Garay,Bradley A. Goodman,Tonia Korves,Lynette Hirschman,Patricia L. McDermott,Matthew W. Peterson +8 more
TL;DR: In this paper, the authors describe a framework for evaluating systems engaged in open-ended complex scenarios where evaluators do not have the luxury of comparing performance to a single right answer.
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Final Report on MITRE Evaluations for the DARPA Big Mechanism Program
TL;DR: The evaluation approach developed for the DARPA Big Mechanism program as mentioned in this paper aimed at developing computer systems that will read research papers, integrate the information into a computer model of cancer mechanisms, and frame new hypotheses.
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