Ben Taylor
University of Oxford
4 Papers
Ben Taylor is an academic researcher from University of Oxford. The author has contributed to research in topics: Genome & Whole genome sequencing. The author has an hindex of 2, co-authored 4 publications. Previous affiliations of Ben Taylor include Wellcome Trust Sanger Institute.
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Papers
Whole-genome sequencing as part of national and international surveillance programmes for antimicrobial resistance: A roadmap
C. Vegyari,Anthony Underwood,Mihir Kekre,Silvia Argimon,Dawn Muddyman,Monica Abrudan,Celia C. Carlos,Pilar Donado-Godoy,Iruka N. Okeke,K L Ravikumar,Khalil Abudahab,Ayorinde O Afolayan,Alejandra Arevalo,J. Bernal-Morales,Erik C D Osma Castro,June M Gayeta,Vandana Govindan,M.F. Guerrero,Harry Harste,Elmer M Herrera,Jolaade J Ajiboye,P.K. Valdenarro,Marietta L Lagrada,Melissa Ana Masim,Ali Molloy,Geetha Nagaraj,Anderson O Oaikhena,Agnettah M Olorosa,Akshata Prabhu,V. Shammana,M R Shincy,D Sravani,John Stelling,Ben Taylor,Nicole E. Wheeler,A. Schmider,David M. Aanensen +36 more
Rapid Genomic Characterization and Global Surveillance of Klebsiella Using Pathogenwatch.
Silvia Argimón,Sophia David,Anthony Underwood,Monica Abrudan,Nicole E. Wheeler,Mihir Kekre,Khalil Abudahab,Corin A. Yeats,Richard Goater,Ben Taylor,Harry Harste,Dawn Muddyman,Edward J. Feil,Sylvain Brisse,Kathryn E. Holt,Kathryn E. Holt,Pilar Donado-Godoy,K L Ravikumar,Iruka N. Okeke,Celia C. Carlos,David M. Aanensen +20 more
TL;DR: Pathogenwatch as mentioned in this paper is a web application for real-time analysis of Klebsiella genomes to aid surveillance at local, national, and global levels, which can identify hospital outbreaks, detect introductions from abroad, and uncover clonal expansions associated with resistance and virulence genes.
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Rapid Genomic Characterization and Global Surveillance of Klebsiella Using Pathogenwatch
Silvia Argimon,Sophia David,Anthony Underwood,Monica Abrudan,Nicole E. Wheeler,Mihir Kekre,Khalil Abudahab,Corin A. Yeats,Richard Goater,Ben Taylor,Harry Harste,Dawn Muddyman,Edward J. Feil,Sylvain Brisse,Kathryn E. Holt,Pilar Donado-Godoy,K L Ravikumar,Iruka N. Okeke,Celia C. Carlos,David M. Aanensen +19 more
TL;DR: Pathogenwatch as mentioned in this paper is a free web application for analysis of Klebsiella genomes to aid surveillance at local, national and global levels, which can identify hospital outbreaks, detect introductions from abroad, and uncover clonal expansions associated with resistance and virulence genes.
Globetrotting strangles: the unbridled national and international transmission of Streptococcus equi between horses.
Catriona Mitchell,Karen F. Steward,Amelia R. L. Charbonneau,Saoirse Walsh,Saoirse Walsh,Hayley Wilson,Hayley Wilson,John F. Timoney,Ulli Wernery,Marina Joseph,David. Craig,Kees van Maanen,Annelies Hoogkamer-van Gennep,Albertine Léon,Lucjan Witkowski,Magdalena Rzewuska,Ilona Stefańska,Monika Żychska,Gunther van Loon,Raymond T. Cursons,Olivia Anne Patty,Els Acke,James R. Gilkerson,CM El-Hage,Joanne L. Allen,Hiroshi Bannai,Yuta Kinoshita,Hidekazu Niwa,Teótimo Becú,John Pringle,Bengt Guss,Reinhard Böse,Y. Abbott,Lisa M. Katz,Bernadette Leggett,Tom Buckley,Shlomo E. Blum,Fatima Cruz Lopez,Ana Fernández Ros,Maria Cristina Marotti Campi,Silvia Preziuso,Carl Robinson,J. Richard Newton,Ellen Schofield,Ellen Schofield,Ben T Brooke,Mike Boursnell,Nicolas de Brauwere,Roxane Kirton,Roxane Kirton,Charlotte K. Barton,Khalil Abudahab,Khalil Abudahab,Ben Taylor,Ben Taylor,Corin A. Yeats,Corin A. Yeats,Richard Goater,Richard Goater,David M. Aanensen,David M. Aanensen,Simon R. Harris,Julian Parkhill,Matthew T. G. Holden,Matthew T. G. Holden,Andrew S. Waller,Andrew S. Waller +66 more
- 08 Mar 2021
TL;DR: In this article, the authors report the analysis and visualization of phylogenomic and epidemiological data for 670 isolates of S. equi recovered from 19 different countries using a new core-genome multilocus sequence typing (cgMLST) web bioresource.