Beeke Wienert
Gladstone Institutes
30 Papers
65 Citations
Beeke Wienert is an academic researcher from Gladstone Institutes. The author has contributed to research in topics: Biology & CRISPR. The author has an hindex of 14, co-authored 19 publications. Previous affiliations of Beeke Wienert include University of California, Berkeley & University of New South Wales.
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Papers
Unbiased detection of CRISPR off-targets in vivo using DISCOVER-Seq.
Beeke Wienert,Beeke Wienert,Stacia K. Wyman,Christopher D. Richardson,Charles D. Yeh,Pinar Akcakaya,Michelle J. Porritt,Michaela Morlock,Jonathan T. Vu,Katelynn R. Kazane,Hannah L. Watry,Hannah L. Watry,Luke M. Judge,Luke M. Judge,Bruce R. Conklin,Bruce R. Conklin,Marcello Maresca,Jacob E. Corn +17 more
TL;DR: DISCOVER-Seq as mentioned in this paper is a universally applicable approach for unbiased off-target identification that leverages the recruitment of DNA repair factors in cells and organisms, tracking the precise recruitment of MRE11 uncovers the molecular nature of Cas activity in cells with single base resolution.
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Natural regulatory mutations elevate the fetal globin gene via disruption of BCL11A or ZBTB7A binding
Gabriella E. Martyn,Beeke Wienert,Lu Yang,Manan Shah,Laura J. Norton,Jon Burdach,Ryo Kurita,Yukio Nakamura,Richard C. M. Pearson,Alister P. W. Funnell,Kate G. R. Quinlan,Merlin Crossley +11 more
TL;DR: It is found that the major fetal globin gene repressors BCL11A and ZBTB7A directly bound to the sites at –115 and –200 bp, respectively, and introduced of naturally occurring HPFH-associated mutations into erythroid cells by CRISPR–Cas9 disrupted repressor binding and raised γ-globin gene expression.
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Editing the genome to introduce a beneficial naturally occurring mutation associated with increased fetal globin
Beeke Wienert,Alister P. W. Funnell,Laura J. Norton,Richard C. M. Pearson,Lorna Wilkinson-White,Krystal L. Lester,Jim Vadolas,Matthew H. Porteus,Jacqueline M. Matthews,Kate G. R. Quinlan,Merlin Crossley +10 more
TL;DR: This work introduces the naturally occurring Hereditary Persistance of Fetal Haemoglobin -175T>C point mutation associated with elevated fetal γ-globin into erythroid cell lines and shows that this mutation increases fetal globin expression through de novo recruitment of the activator TAL1 to promote chromatin looping of distal enhancers to the modified γ -globin promoter.
In vitro-transcribed guide RNAs trigger an innate immune response via the RIG-I pathway
TL;DR: It is shown that the IVT gRNAs commonly used by many laboratories for RNP editing trigger a potent innate immune response that is similar to canonical immune-stimulating ligands, and removal of the 5’-triphosphate from g RNAs ameliorates inflammatory signaling and prevents the loss of viability associated with genome editing in hematopoietic stem cells.
Wake-up Sleepy Gene: Reactivating Fetal Globin for β-Hemoglobinopathies.
Beeke Wienert,Beeke Wienert,Gabriella E. Martyn,Alister P. W. Funnell,Kate G. R. Quinlan,Merlin Crossley +5 more
TL;DR: Recent discoveries in hemoglobin were summarized, focusing on the influence of genome editing technologies, including CRISPR-Cas9, and emerging gene therapy approaches.
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