Antoine M. van Oijen
Illawarra Health & Medical Research Institute
215 Papers
979 Citations
Antoine M. van Oijen is an academic researcher from Illawarra Health & Medical Research Institute. The author has contributed to research in topics: Replisome & DNA replication. The author has an hindex of 50, co-authored 184 publications. Previous affiliations of Antoine M. van Oijen include Leiden University & University of Wollongong.
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Papers
Lipids Activate SecA for High Affinity Binding to the SecYEG Complex
Sabrina Koch,Janny G. de Wit,Iuliia Vos,Jan Peter Birkner,Pavlo Gordiichuk,Andreas Herrmann,Antoine M. van Oijen,Antoine M. van Oijen,Arnold J. M. Driessen +8 more
TL;DR: This work establishes that SecA gains access to the SecYEG complex via a lipid-bound intermediate state, whereas acidic phospholipids allosterically activate SecA for ATP-dependent protein translocation.
A single-molecule view of DNA replication: the dynamic nature of multi-protein complexes revealed
TL;DR: This review will discuss single-molecule studies of the replisome, the protein complex responsible for the coordinated replication of double-stranded DNA, and will focus on new insights obtained into the dynamic nature of the composition of the DNA-replication machinery and how the dynamic replacement of components plays a role in the regulation of theDNA-replications process.
Single-molecule live-cell imaging visualizes parallel pathways of prokaryotic nucleotide excision repair.
Harshad Ghodke,Harshad Ghodke,Han Ngoc Ho,Han Ngoc Ho,Antoine M. van Oijen,Antoine M. van Oijen +5 more
TL;DR: Single-molecule fluorescence imaging is used to quantify the kinetic signatures of interactions of UvrA with Mfd and UvrB in live cells to illustrate a non-perturbative, imaging-based approach to quantify the kinetic signature of damage recognition enzymes participating in multiple pathways in cells.
Influenza-virus membrane fusion by cooperative fold-back of stochastically induced hemagglutinin intermediates
Tijana Ivanovic,Tijana Ivanovic,Jason L. Choi,Sean P. J. Whelan,Antoine M. van Oijen,Stephen C. Harrison,Stephen C. Harrison +6 more
TL;DR: Effects of mutations in HA indicate that withdrawal of the fusion peptide from a pocket in the pre-fusion trimer is rate-limiting for both events, but the requirement for cooperative action of several HAs to bring the fusing membranes together leads to a long-lived intermediate state for single, extended HA trimers.
CHD4 slides nucleosomes by decoupling entry- and exit-side DNA translocation
Yichen Zhong,Bishnu P. Paudel,Bishnu P. Paudel,Daniel P. Ryan,Jason Low,Charlotte Franck,K. Patel,Max J. Bedward,Mario Torrado,Richard J. Payne,Antoine M. van Oijen,Antoine M. van Oijen,Joel P. Mackay +12 more
TL;DR: It is demonstrated that the binding energy for CHD4-nucleosome complex formation—even in the absence of nucleotide—triggers significant conformational changes in DNA at the entry side, effectively priming the system for remodelling.