Andrei K. Larin
Peninsular Malaysia
9 Papers
29 Citations
Andrei K. Larin is an academic researcher from Peninsular Malaysia. The author has contributed to research in topics: Gut flora & Gene. The author has an hindex of 6, co-authored 9 publications. Previous affiliations of Andrei K. Larin include Kazan Federal University & Federal Biomedical Agency.
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Papers
Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease.
Veronika Dubinkina,Alexander V. Tyakht,Vera Odintsova,Konstantin S. Yarygin,Boris A. Kovarsky,Alexander V. Pavlenko,Dmitry S. Ischenko,Anna S. Popenko,Dmitry G. Alexeev,Anastasiya Y. Taraskina,R. F. Nasyrova,Evgeny Krupitsky,Nino V. Shalikiani,Igor G. Bakulin,P L Shcherbakov,L O Skorodumova,Andrei K. Larin,Elena S. Kostryukova,Rustam A. Abdulkhakov,Sayar Abdulkhakov,Sayar Abdulkhakov,Sergey Malanin,R. K. Ismagilova,Tatiana V. Grigoryeva,Elena N. Ilina,Vadim M. Govorun +25 more
TL;DR: Taxonomic and functional analysis shows an increased propensity of the gut microbiota to synthesis of the toxic acetaldehyde, suggesting higher risk of colorectal cancer and other pathologies in alcoholics.
Genome analysis of E. coli isolated from Crohn’s disease patients
Daria V. Rakitina,Alexander I. Manolov,Alexandra V. Kanygina,Sofya K. Garushyants,Sofya K. Garushyants,Julia Baikova,Dmitry G. Alexeev,V. G. Ladygina,E. S. Kostryukova,Andrei K. Larin,Tatiana A. Semashko,Irina Y. Karpova,Vladislav V. Babenko,R. K. Ismagilova,R. K. Ismagilova,Sergei Y. Malanin,Sergei Y. Malanin,Mikhail S. Gelfand,Elena N. Ilina,R B Gorodnichev,Eugenia S. Lisitsyna,Gennady I. Aleshkin,Petr Scherbakov,Igor L. Khalif,Marina V. Shapina,Igor V. Maev,D N Andreev,Vadim M. Govorun +27 more
TL;DR: Though no CD-specific genes or functional domains were present in all CD-associated strains, some genes and operons are more often found in the genomes of CDEC than in commensal E. coli.
Data on gut metagenomes of the patients with Helicobacter pylori infection before and after the antibiotic therapy.
Oksana E. Glushchenko,A. Samoilov,A. Samoilov,Evgenii I. Olekhnovich,Boris A. Kovarsky,Alexander V. Tyakht,Alexander V. Tyakht,Alexander V. Pavlenko,Alexander V. Pavlenko,Vlad V. Babenko,Andrei K. Larin,Elena S. Kostryukova,Elena S. Kostryukova,Maja V. Malakhova,Elena N. Ilina,Abdulkhakov Ra,Dilyara Safina,Tatiana V. Grigoryeva,Sayar Abdulkhakov,Sayar Abdulkhakov,Vadim M. Govorun,Vadim M. Govorun +21 more
TL;DR: The changes in taxonomic and functional composition of microbiota in patients can be assessed using “shotgun” metagenomic sequencing using Illumina HiSeq platform.
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Data on gut metagenomes of the patients with alcoholic dependence syndrome and alcoholic liver cirrhosis
Alexander V. Tyakht,Veronika Dubinkina,Vera Odintsova,Konstantin S. Yarygin,Boris A. Kovarsky,Alexander V. Pavlenko,Dmitry S. Ischenko,Anna S. Popenko,Dmitry G. Alexeev,Anastasiya Y. Taraskina,R. F. Nasyrova,Evgeny M. Krupitski,Nino V. Shalikiani,Igor G. Bakulin,P L Shcherbakov,L O Skorodumova,Andrei K. Larin,Elena S. Kostryukova,Rustam A. Abdulkhakov,Sayar Abdulkhakov,Sergey Malanin,R. K. Ismagilova,Tatiana V. Grigoryeva,Elena N. Ilina,Vadim M. Govorun +24 more
TL;DR: Stool samples from patients with alcoholic dependence syndrome and alcoholic liver cirrhosis were collected and the entire genome was surveyed using “shotgun” (whole-genome) sequencing on SOLiD platform.
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MALINA: a web service for visual analytics of human gut microbiota whole-genome metagenomic reads
Alexander V. Tyakht,Anna S. Popenko,Maxim S. Belenikin,Ilya Altukhov,Alexander V. Pavlenko,Elena S. Kostryukova,Oksana V. Selezneva,Andrei K. Larin,Irina Y. Karpova,Dmitry G. Alexeev +9 more
TL;DR: The MALINA web service allows phylogenetic and functional profiling of metagenomic samples using coverage depth resulting from the alignment of the reads to the catalogue of reference sequences which are built into the pipeline and contain prevalent microbial genomes and genes of human gut microbiota.